Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00253 ATGACCCGAGATAGGGTGAAGGAGCGAGCTAAAGAAGCCCACAATAGGACTGAAAAACTTGAGCCAACTGTTGAGAAGTGGCTGGAAGATGTGGAGAATGTCTTAGAAGAAGTGCAACTGCTGGAAGGAAGAATATCGGAAGTGAACAAGAGCTATTTCAAAAGGCAATGTCAATATTTCCTTGCAAAAGAAATAGCAAGAAAAACAGAAGAAATTATTCAGCTCGATCGTAACAGCAAGTTTGAACCATTTTCCAGGATCACAGAACTTCCAGGCATGAAGTACTTTTCTTCCAATAATTTTGTTCTTTTCAATTCCACGGAAACAGCATACAAGCAGCTTTTGGAAGCATTAAAGGATAAAAGTTGTTCCATGATTGGATTAGTTGGAATAGGAGGCTCAGGAAAAACTACTTTGGCAAAAGAAGTTGGTAAAAAGGTTCAAGAGTTGAAACTCTTTGAGAAGGTTGCCATGGCAACGGTCTCTCAAACTCCAAGTATCACAAGTATTCAAGACCAGATTGCCGATCAATTAAATCTCTATTTAAAGGAAGCATCAGAGATAGGTAGAGCACAAAGACTATCTAAGACATTAAGGAATGGTACAACTCTTCTAATCTTGGATGATGTGTGGGAAAAGCTAAATTTTGAAGCTTTAGGTATTCCCTTCGATGAAAACACTAAGGGTTGTTGCGTACTCCTAACAACTCGGAGTACAGAAGTATGCGCTTTTATGCAATGCCAGAGTATAATTGAGCTTCATCTCTTGACTGACAAGGAAGCTTGGTCCTTATTCACATCGTATGCAAACATAACTGATGCGTACTCTGAAGCTTTGAAAGGCGTGGCAAGAAAAATTGTTAATCATTGCAAGGGATTGCCTATTGCAATTGTGACGGTGGGAAGCACACTTAGGGGGAAAACTATTGAGGAGTTTGAGTTAGCCTTGTCAAGACTAGAAGATTCCAAACCATTAGATATTCCAAGAGGCTTCACAAGTCCTCATGTTTGTCTTGAATTAAGTTATATTAATTTGACAAATCAATTATCCAAGTCTTTGTTATTGTTGTGTTCTATATTTCCAGAGGACTATGAAATTGATTTGGAAGATTTGTTTCGATTTGGAAGGGGATTGGGCATAACTGGGAAGTTTGGGACATTGGAGGAGGCAAGGAGGGAGATGCATGTAGCTATTACCAGCCTCAGGAATTCTTGTTTGTTGATGAATTCCAATAAAAAAGAAAGGGTGAAAATGCATGACATGGTCCGTGACGTAGCCTTATGGATTGCATCTAAAACTGGTCAAGAAATTTTGGCAAGTGCTAAAATGGATCCAAGAGTGTTGGTAGAGGACGAAATCATGAAAGATAAGAAAGCAATAGCCTTGTGGGGTTTGAAAAAAGATCAGGTACTTGGTGATTATAAAATAAACTGTCCAACACTTGAAATTCTCCTGGTTTGTGAAGAAGTCGGCTTCAATGTGTCAGATGCGTGTCTTGAAAGCTTGGAAAGGCTTAAAATCTTGGCAATCTTAAATTTACCATGGAGAACAAGATACTCAAAATCTACTTTGCCATTGCCTGTGTCATTAAAGTCATTACAAAATCTTCAAACACTGTGCTTGAGAGGTTATAAATTAGGTAACATATCTGTTTTGGAAAGCCTGCAAGCACTTGAGATTCTTGACTTGCGTGGTTCTATTTTTGAAGAACTGCCTATTGGGATTGTAGATTTAAAGAAGTTGAAGCTTCTGGATTTGTACTATTGTCAGATTGAAAAAAATAATGCTTATGAAGTTGTTGGAAAATGTTTGCGTCTAGAGGAATTGTATTTGTATTTCATCCAATTTGTAGATGACTTTCCACGTAATGTCTCTTTTTCCAGATTACAGAGGTATTCTATAATAATACAAGGTAAGTTTAGTATTTTGGAAGACTTTGTGCATAATAGGAGTATGGAACAACTCAGACCATCTAGAGCTTTATGCATAGAGAGGTTTCAAAGATTTATATCTCCGCTTAATGATCTCTTTATAAGAGCAGACTATCTTTATCTGAAGTACTTTGAGGGAGATTATCAAAATGTAATCCCATCCATGGATCCAAAAGGCATGAATCAGTTGATTGTCCTAAAACTCCATTCTTGTCCAGTGATAGAATGTCTGTATGACAGTACAATCATTAGAAACAATATTAATATGCTTCAAACTGAAGTTGTATTCTCTAGCCTTGTTAAGTTAAGGTTGTCCCAATTAGATAGCCTTCGAGAGTTGTTTCGTGATCCCAATTTCCGATGTTCTCTCAAAAATTTAGAAGAACTCCTGATAGCAGGTTGCAAACAATTGAACAACATATCATTTCCAAGGAACTCAAAGCTATGCAATCTCAAGTTACTTATAATAGGAGGATGCCCATTGCCAACTTCACTCTTCATGCCATCCGTTGTCCAAACCCTACTGCTGCTGGAGGTTCTTGAAATATCTTCCTGCACCTCATTGAGGCACATAATAGAAGAAGTGGAAGAAGGGAATGCTGATTTTTCAAGCACTCGAAATCATTCTTCTTTGACGTTCCCAAAATTAAGGACTCTTCTCATTGAAAGATGCGAGAAGTTGGAATATATATTCTCTGTGTTCTTAGCCCAAGGGCTAGTAAATTTGGAAAGTGTGAAAGTACTTAGCAACTCGAAGTTGAAGTACGTATTTGGCAGTGAAAAGGAACATAATTACCACTATCAGAGTTTCCAGCAGACTAATACTGGCAGAAATTTGCCTAATTTGGATACTCTCGAGTTGATGAACTTACCAAATCTGAGTGCTTCGCTTGACTGA 2829 0.3782 MTRDRVKERAKEAHNRTEKLEPTVEKWLEDVENVLEEVQLLEGRISEVNKSYFKRQCQYFLAKEIARKTEEIIQLDRNSKFEPFSRITELPGMKYFSSNNFVLFNSTETAYKQLLEALKDKSCSMIGLVGIGGSGKTTLAKEVGKKVQELKLFEKVAMATVSQTPSITSIQDQIADQLNLYLKEASEIGRAQRLSKTLRNGTTLLILDDVWEKLNFEALGIPFDENTKGCCVLLTTRSTEVCAFMQCQSIIELHLLTDKEAWSLFTSYANITDAYSEALKGVARKIVNHCKGLPIAIVTVGSTLRGKTIEEFELALSRLEDSKPLDIPRGFTSPHVCLELSYINLTNQLSKSLLLLCSIFPEDYEIDLEDLFRFGRGLGITGKFGTLEEARREMHVAITSLRNSCLLMNSNKKERVKMHDMVRDVALWIASKTGQEILASAKMDPRVLVEDEIMKDKKAIALWGLKKDQVLGDYKINCPTLEILLVCEEVGFNVSDACLESLERLKILAILNLPWRTRYSKSTLPLPVSLKSLQNLQTLCLRGYKLGNISVLESLQALEILDLRGSIFEELPIGIVDLKKLKLLDLYYCQIEKNNAYEVVGKCLRLEELYLYFIQFVDDFPRNVSFSRLQRYSIIIQGKFSILEDFVHNRSMEQLRPSRALCIERFQRFISPLNDLFIRADYLYLKYFEGDYQNVIPSMDPKGMNQLIVLKLHSCPVIECLYDSTIIRNNINMLQTEVVFSSLVKLRLSQLDSLRELFRDPNFRCSLKNLEELLIAGCKQLNNISFPRNSKLCNLKLLIIGGCPLPTSLFMPSVVQTLLLLEVLEISSCTSLRHIIEEVEEGNADFSSTRNHSSLTFPKLRTLLIERCEKLEYIFSVFLAQGLVNLESVKVLSNSKLKYVFGSEKEHNYHYQSFQQTNTGRNLPNLDTLELMNLPNLSASLD 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00253 942 Gene3D - 96 252 IPR027417 -
Spst8g00253 942 Gene3D - 255 339 IPR042197 -
Spst8g00253 942 Coils Coil 24 51 - -
Spst8g00253 942 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 2 874 - -
Spst8g00253 942 Gene3D - 340 427 IPR036388 -
Spst8g00253 942 Gene3D Ribonuclease Inhibitor 681 941 IPR032675 -
Spst8g00253 942 Gene3D Ribonuclease Inhibitor 469 659 IPR032675 -
Spst8g00253 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 355 IPR027417 -
Spst8g00253 942 PRINTS Disease resistance protein signature 816 832 - -
Spst8g00253 942 PRINTS Disease resistance protein signature 197 211 - -
Spst8g00253 942 PRINTS Disease resistance protein signature 125 140 - -
Spst8g00253 942 PRINTS Disease resistance protein signature 290 304 - -
Spst8g00253 942 Pfam NB-ARC domain 111 322 IPR002182 GO:0043531
Spst8g00253 942 FunFam Probable disease resistance protein At1g61300 93 249 - -
Spst8g00253 942 SUPERFAMILY L domain-like 417 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00253 Spst-Chr8 2237287 2240384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00253 111 432 WRKY Transcription Factor Family AT5G45050 26.706 2.26e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00253 - - gmx:102663325 1111.67