Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00252 ATGGGGTTGTTTTTGGAAAAGGGGCAAGAAAATCACTTTGCTGAGTTGAGGAGAAATATTGAAGAGGTTTTGGGATCTGCCGGTGGCATCACTGATCCCACTGAAGTTGATGCATTAGGAATCATAAAGGGAAGTTTGATTGATATTAATGGAAATTTGACCAACTGGGGTGATGGAGACCCATGTACATCTAACTGGACAGGGGTTATGTGCTCTTATACAACATTAGTCGATGGCTATCTACATGTTCAAGAACTGCATTTTCTGAAGATGAACTTGTCTGGAACTTTGGCACCAGAGATTGGCCGCTTATCTTATCTGCAAATATTGGACTTTATGTGGAATAACATTACTGGGAGTATACCCAAGGAAATTGGCACTATCGGTCCTTTGAGACTCATACTCCTGAGTGGAAATCAATTGACAGGTGAGTTACCAGAAGATCTTGGCTTTCTTCCGTCCCTGTTCAAATTGCAAATAGATCAGAACAATATCACGGGACCTATACCTTTATCATTTGCAAAACTAAGCCGCACTGTACATTTCCTTCTTGACAACAACAACTTAACTGGAGATCTTCCCCCTGAGCTCTCTCAGATGCCAAGCTTGAAGATTCTTCAACTTGATAACAACAACTTTGGTGGAAATATTCCAGATTCTTACGCAAACATGTCCAAATTGATAAAACTGAGTCTTAGGAACTGCAGCTTGCAAGGACCAATTCCTGATTTGAGTAGGATACCAAACCTTACTTTAGTTGACCTCAGTTTCAATCAGTTGAACGGGTCAATTCCAACTAATAAACTTTCAGCCAATATCACAACCATTGATTTATCAAACAATAATCTTATTGGAACTATTCCATCCTACTTTTCTGGCCTTCCAAATCTTCAGAAGCTGTCAATTGAAAACAATTCATTGAATGGCAGTGTTCCTTCAACAATTTGGCAGGACAGGATTTTAAATGGATCAGAAATGCTTCGCTTAGCTGGTGAATGGGGAGCTGAATTAATTGAGGGTACAGGTGCTACTGAATTTTGCAGTATAAATCTTCCTCCAAATGTCACCCTCTGGCTTGAGGGAAATCCTATGTGCACAAATAATAACACCTTAGTTCAGTTCTGTGGACCTAAAAGTGACAGTAGCACCAATGGTAACTTCAGTGTTAGCTGTCCCATCCAAGCATGCCCCCCTCCTTATGAATCCACCGTGGACTGTTTCTGTGCTGCCCCTTTGATTGTTGATTATCGATTAAAAAGTCCAGGATTTTCAGATTTCCTCACCTACATGAGTTACTTTCAGAGCCACTTGTCAATTAATCTTAAAATAAATATTAATCAACTCTATATCGACAATTTTGAATGGGAAGAAGGTCCTCGGTTGGGAATGAACTTGAAGATTTTTCCTATATATGTTGATAGTAACAGCTCTCATGTTTTCAATAAAAGTGAGGTTCTTCGGATCAGAGACTTGTTCATAGACTTTAAACTTCCAGGCAATGACTTCCTTGGACCTTATGAAATTCTAGACTTCATTCTCCTGGATCTCTACAGAGATGGGATAAGCAAAGGTGCACTTGCTGGTATAGTCTTAGGTGCAACTGCTTTTTTGGTTACTTTATCCGCAATTGTCACCATTCTCATACGGAGAATACGTTTGAGAGATAATCGTACACCTTCCAAACGGCCAAAAGGTATAAGATCATTTGATTATGAAGAAATGGCTAGCGCAACAAACAATTTTAGTAACTCTGCTCAAATTGGACAAGGAGGGTATGGGAGTGTTTTTAAAGGTCTTCTTCCTGATGGCACTGTTGTTGCCATAAAACGTGCACAGGAGGGTTCACTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAACTGCTATCAAGATTACATCACCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGATGTTGGTTTATGAATATATGCCAAATGGAACGCTAAAGGATCATCTTTCTGCTCATTCAGAAAAAACACTTACTTTTTCCATGAGGATGAAGATTGCTCTAGGGTCAGCTAAAGGTCTTCTGTATCTACACAATGAAGTAGATCCTCCAATATTCCACCGAGATGTGAAGGCCAGCAATATATTATTGGACTCCAAGTTCACAGCAAAAGTGGCTGACTTTGGACTTTCACGACTTGCCCCAGTTCAAGATACAGAAGGAAACGTACCTGGTCATGTATCTACTGTGGTAAAGGGGACCCCGGGTTATATTGATCCAGAGTACTTCTTAACTCACAAAATGACTGAGAAGAGTGATGTTTATAGTCTTGGTGTTGTCTTTCTAGAACTAGTGACTGGGCGGCCAGCAATATTTCATGGCAAAAATATTATTAGACAGGTTAATATGGCATACGAATCGGGTGGATTGTTTTCAGTTATTGATAAACGTATTGGCTCTTATCCCTCAAAATACATGGAGAAATTTTTGATGTTGGCCTTAAGGTGTTGCAAAGATGCACCAGAAGAGCGACCTAAAATGGCAGAAGTGGCTAGAGAGCTTGAAAAAATCTGTTCAATGTTACCGGAGATCAATGCTGTGGAAGCAGAATATGTGACAAGTGATTTTGGAAGAATGTTCAGTTCACAACCTTCATCATCTACAATCAGCAGGAATCCTTATGTGTCTGAGGATGTGTCAGGTAGTGACCTTGTCAGTGGAAAGATACCAACCATTAGGCCAAGATAA 2736 0.4017 MGLFLEKGQENHFAELRRNIEEVLGSAGGITDPTEVDALGIIKGSLIDINGNLTNWGDGDPCTSNWTGVMCSYTTLVDGYLHVQELHFLKMNLSGTLAPEIGRLSYLQILDFMWNNITGSIPKEIGTIGPLRLILLSGNQLTGELPEDLGFLPSLFKLQIDQNNITGPIPLSFAKLSRTVHFLLDNNNLTGDLPPELSQMPSLKILQLDNNNFGGNIPDSYANMSKLIKLSLRNCSLQGPIPDLSRIPNLTLVDLSFNQLNGSIPTNKLSANITTIDLSNNNLIGTIPSYFSGLPNLQKLSIENNSLNGSVPSTIWQDRILNGSEMLRLAGEWGAELIEGTGATEFCSINLPPNVTLWLEGNPMCTNNNTLVQFCGPKSDSSTNGNFSVSCPIQACPPPYESTVDCFCAAPLIVDYRLKSPGFSDFLTYMSYFQSHLSINLKININQLYIDNFEWEEGPRLGMNLKIFPIYVDSNSSHVFNKSEVLRIRDLFIDFKLPGNDFLGPYEILDFILLDLYRDGISKGALAGIVLGATAFLVTLSAIVTILIRRIRLRDNRTPSKRPKGIRSFDYEEMASATNNFSNSAQIGQGGYGSVFKGLLPDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQMLVYEYMPNGTLKDHLSAHSEKTLTFSMRMKIALGSAKGLLYLHNEVDPPIFHRDVKASNILLDSKFTAKVADFGLSRLAPVQDTEGNVPGHVSTVVKGTPGYIDPEYFLTHKMTEKSDVYSLGVVFLELVTGRPAIFHGKNIIRQVNMAYESGGLFSVIDKRIGSYPSKYMEKFLMLALRCCKDAPEERPKMAEVARELEKICSMLPEINAVEAEYVTSDFGRMFSSQPSSSTISRNPYVSEDVSGSDLVSGKIPTIRPR 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00252 911 MobiDBLite consensus disorder prediction 878 895 - -
Spst8g00252 911 Pfam Leucine rich repeat 272 316 IPR001611 GO:0005515
Spst8g00252 911 ProSiteProfiles Protein kinase domain profile. 581 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00252 911 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 657 866 - -
Spst8g00252 911 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 52 863 - -
Spst8g00252 911 CDD STKc_IRAK 587 853 - -
Spst8g00252 911 SUPERFAMILY Protein kinase-like (PK-like) 566 884 IPR011009 -
Spst8g00252 911 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 151 241 - -
Spst8g00252 911 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Spst8g00252 911 FunFam Leucine-rich repeat receptor-like kinase 34 150 - -
Spst8g00252 911 Gene3D Transferase(Phosphotransferase) domain 1 657 868 - -
Spst8g00252 911 SMART serkin_6 581 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00252 911 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Spst8g00252 911 SUPERFAMILY L domain-like 31 366 - -
Spst8g00252 911 Gene3D Phosphorylase Kinase; domain 1 552 656 - -
Spst8g00252 911 Gene3D Ribonuclease Inhibitor 33 323 IPR032675 -
Spst8g00252 911 FunFam Leucine-rich repeat protein kinase family protein 548 656 - -
Spst8g00252 911 ProSitePatterns Protein kinases ATP-binding region signature. 587 609 IPR017441 GO:0005524
Spst8g00252 911 Pfam Protein kinase domain 582 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00252 911 MobiDBLite consensus disorder prediction 878 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00252 Spst-Chr8 2222288 2234931 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00252 31 859 Receptor kinase-like Gene Family AT5G01950 52.376 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Spst8g00252 Pkinase 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00252 - - gmx:100785752 1352.81