Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00251 ATGGCCTTGGCTACAAACAATTTTAGCGAGTCTGCTCAAATTGGAGAAGGGGGCTATGGGAAGGTTTATAAAGGTCGTCTTCCAGATGGTACTGTTGTTGCCATAAAACGTGCACAAGAGGGTTCATTGCAAGGTGAGAGGGAGTTCCTTACAGAAATAGAATTGCTATCAAGGCTACACCATCGCAACCTTGTGTCTCTGATTGGATACTGTGATGAAGAGGGTGAACAGGCTATGGTTTGTCCTAAAATGTTGGTTTATGAATATATGCCAAATAAAACTCTTAGGGATCACCTTTCTGTTCATTCAAAAGAAGCTCTTAGTTTTTCTCTGAGGTTGAAGATTGCTCTAGGATCAGCAAAAGGTCTTTTATATCTACACACAGAAGCTGATCCTCCAATATTCCACCGAGATGTGAAGGCCAGCAATATATTATTGGACTCTAGGTACACAGCAAAAGTTGCTGATTTTGGACTTTCAAGACTTGCTCCAGTTCCAGATACTGAAGGAAATGTACCTGGTCATGTATCGACAGTAGTAAAGGGGACCCCGGGTTACCTTGATCCAGAATACTTCTTAACTCGTAATTTGACTGACAAAAGTGATGTTTATAGTCTTGGTGTTGTATTTCTGGAACTTTTGACTGGGAGGCCACCGATCTATCATGGTGAAAATATTATTAGACAGGTTAATATGGCTTACCGATCTGGTGGAATATCTTTGGTTGTTGATAAACGTTTTGAGTCTTATCCTTCAGAGTATGCAGAGAAATTTTTGACTTTAGCCTTGAAGTGCTGCAAAGATTTACCAGATGAGAGGCCTAAAATGGCAGAAGTGGCAAGAGAGCTTGAATACATGTGTTCTATGTTACCCGAGTCAAATACCAAGGGACCTGAATATGTTGCAAGTGATTCTTCTGGTACAATATTCAGTTCACAACCTTCATCATCTACTACAAAGACTGCTTTTATTTCAGGAGATGTGTCAGGCAGTGACCTTGTCAGTGGAAGTATACCAACCATCAAGCCAAGATAG 1035 0.4068 MALATNNFSESAQIGEGGYGKVYKGRLPDGTVVAIKRAQEGSLQGEREFLTEIELLSRLHHRNLVSLIGYCDEEGEQAMVCPKMLVYEYMPNKTLRDHLSVHSKEALSFSLRLKIALGSAKGLLYLHTEADPPIFHRDVKASNILLDSRYTAKVADFGLSRLAPVPDTEGNVPGHVSTVVKGTPGYLDPEYFLTRNLTDKSDVYSLGVVFLELLTGRPPIYHGENIIRQVNMAYRSGGISLVVDKRFESYPSEYAEKFLTLALKCCKDLPDERPKMAEVARELEYMCSMLPESNTKGPEYVASDSSGTIFSSQPSSSTTKTAFISGDVSGSDLVSGSIPTIKPR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00251 344 ProSitePatterns Protein kinases ATP-binding region signature. 14 36 IPR017441 GO:0005524
Spst8g00251 344 SUPERFAMILY Protein kinase-like (PK-like) 3 306 IPR011009 -
Spst8g00251 344 ProSiteProfiles Protein kinase domain profile. 8 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00251 344 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Spst8g00251 344 Gene3D Transferase(Phosphotransferase) domain 1 90 301 - -
Spst8g00251 344 PIRSF ILK 1 297 - -
Spst8g00251 344 FunFam receptor-like protein kinase FERONIA 1 89 - -
Spst8g00251 344 PANTHER OS01G0750732 PROTEIN 2 306 - -
Spst8g00251 344 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Spst8g00251 344 CDD STKc_IRAK 14 284 - -
Spst8g00251 344 SMART serkin_6 8 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00251 344 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 90 299 - -
Spst8g00251 344 Pfam Protein kinase domain 9 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00251 344 MobiDBLite consensus disorder prediction 298 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00251 Spst-Chr8 2216629 2219531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00251 1 296 Receptor kinase-like Gene Family AT5G01950 65.203 7.22e-130 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Spst8g00251 Pkinase 2.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00251 - - gmx:100777308 604.364