LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst8g00241	ATGGATCTCCTCCTCTTGGAGAAGACCCTCCTCGGCCTCTTCCTTGCGGCTGTTGTAGCCATTGCCGTCTCCAAGCTTCGGGGCAAGCGCTTCAAACTCCCGCCGGGCCCACTTCCTGTGCCTGTCTTCGGAAACTGGCTCCAGGTAGGCGACGACCTCAACCACCGCAATCTCACTGACCTAGCCAAGCGCTTTGGCGACATCTTCCTCCTTCGCATGGGACAGCGCAACCTGGTGGTAGTTTCCTCACCGGAACTCGCCAAAGAGGTGCTCCACACGCAGGGCGTGGAGTTTGGCTCCCGCACGCGTAACGTCGTCTTCGACATCTTCACTGGTAAGGGCCAGGACATGGTCTTCACCGTCTACGGAGAGCACTGGCGCAAGATGCGCCGCATCATGACCGTCCCCTTCTTCACCAACAAGGTTGTCCAGCAATACCGCCTCGGTTGGGAGGCCGAGGCCGCCGCCGTCGTCGATGACATCAGAAAAAACCTTGACGCGGCTGTGTCCGGTGTCGTCATCCGCCGCAGGCTCCAGCTCATGATGTACAACAACATGTACCGCATCATGTTCGATCGTAGATTCGAGAGCGAGGAGGATCCTCTGTTCCAGCGTCTGAGAGCGTTGAATGGCGAGAGGAGTCGCTTGGCGCAGAGCTTTGAATATAACTATGGTGATTTCATTCCCATCTTGAGACCCTTCTTGAAGGGTTACTTGAAGATTTGCAAGGAGGTCAAAGATACCAGGTTGAAGCTTTTCAAGGATTACTTCGTGGACGAGAGGAAGAATCTTGGAAGCACCAAAAGCACTAAGAACGATGGACTTAAATGTGCTATTGATCACATTTTGGATGCTCAGAGAAAGGGCGAAATCAACGAAGACAACGTCCTTTACATTGTTGAGAACATCAACGTTGCCGCAATTGAAACAACTCTATGGTCAATTGAATGGGGCATTGCTGAGCTTGTGAACCACCCAGAGATCCAGCAGAAGGTGAGGGATGAGATTGACAGAGTTCTTGGACCAGGGCACCAGGTGACTGAGCCAGATATCCAGAAGCTTCCATACCTTCAAGCAGTGGTAAAGGAAACCCTTCGTCTTAGAATGGCAATCCCTCTCCTTGTCCCACACATGAACCTCCACGATGCTAAGCTTGGTGGCTATGACATCCCAGCTGAGAGCAAGATTTTGGTGAATGCATGGTGGCTGGCCAACAACCCTGCACTCTGGAAGAAGCCAGAAGAGTTCAGGCCTGAGAGGTTCTTCGAAGAGGAGTCCCATGTGGAAGCCAATGGCAATGACTTCAGGTACCTTCCCTTTGGTGTTGGCAGAAGAAGCTGCCCCGGAATCATTCTTGCATTGCCCATTCTTGGCATCACTTTGGGACGTTTGGTCCAAAACTTTGAGCTCTTGCCTCCCCCTGGGCAGTCCCAGATTGACACTAGTGAGAAAGGAGGGCAGTTTAGCTTGCACATACTCAAGCATTCCACCATTGTTGCAAAGCCAAGGTCATTTTAA	1518	0.5224	MDLLLLEKTLLGLFLAAVVAIAVSKLRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKRFGDIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRLGWEAEAAAVVDDIRKNLDAAVSGVVIRRRLQLMMYNNMYRIMFDRRFESEEDPLFQRLRALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKICKEVKDTRLKLFKDYFVDERKNLGSTKSTKNDGLKCAIDHILDAQRKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQQKVRDEIDRVLGPGHQVTEPDIQKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLGGYDIPAESKILVNAWWLANNPALWKKPEEFRPERFFEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRSF	505

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Spst8g00241	505	FunFam	Trans-cinnamate 4-monooxygenase	23	497	-	-
	Spst8g00241	505	PANTHER	TRANS-CINNAMATE 4-MONOOXYGENASE	1	504	-	-
	Spst8g00241	505	Gene3D	Cytochrome P450	23	496	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Spst8g00241	505	SUPERFAMILY	Cytochrome P450	34	503	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Spst8g00241	505	PRINTS	P450 superfamily signature	306	323	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Spst8g00241	505	PRINTS	P450 superfamily signature	359	370	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Spst8g00241	505	PRINTS	P450 superfamily signature	438	447	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Spst8g00241	505	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	440	449	IPR017972	GO:0005506\|GO:0016705
	Spst8g00241	505	CDD	CYP73	63	496	-	-
	Spst8g00241	505	PRINTS	E-class P450 group I signature	181	199	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst8g00241	Spst-Chr8	2061502	2064728	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst8g00241	1	504	Monolignol Biosynthesis Gene Families	AT2G30490	84.325	0.0	883

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst8g00241	K00487		-	gmx:100499623	936.791

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