Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00239 ATGGGTGATCACATGAATAAGGATATGCAGGAAAAACCAATCTTAGCAGCTCTTGAAGATTTATACCAAGGAATCCCAGATGAATCCGTAAACCTCACCTTTCAAGACCTTGCTGAAGTTAACACATCAGAAAAGAGAAAACCCACAGCAACTTCAACAACAACAACCATAGCACCTTCAAGCTCCCTAGCCAAACTACCTAGTCTTGATTTCACCAAAGGCTTGCAAGGTTGTAGTCAACACCGCGTACAGGACTTTGGCTATGGAGAGTCATCACCGTGGGATTATCCTGGTCATTTTAGCCACCATGCTGGTGGTGGCGCGCAAAGACAAATCCCTCAATGCATGGCCAATGGAGATGATCATTCGAAGTATGGTGTGAGCTTTGATGGTGTAAGTGTTGCTTCGGGAAGAGCTACTCGAAGACGTCGACCTGGGATTCCACACTCAAAGATTTGTGCAACTTGTAATACCTATATTTACCTATTCCGTACTAGATGTCTGGTGTGTGGCAGGGTTTATTGCAGGCAATGCGTAGAAATAGGAATGGGAGAGATGGTAGAAGGAAGAAAGTGCATTGAGTGTCTTGGTTTGAGATTCAGTCATAGGTATATAGAAAGAGCAGGAAATGTAGGGTGCTGTAGTTGGAGGTATCCAAAGACATTGAAACAGGTTGAGTTAAAGTGTGCTGAGAAAGGACCAAGAAGAAGTGGAAAATATGGTCACAGTGGGATGCCAAACTCAAGATCACTAAGTCCAAATAAGTGGAGAGAAAGTAGGAAGAGAGTTCAATTGTGTTGTGTGACAAAACTACAAGCTTTTGCCAAACAGATGCAAGATCCATCTTCAAACCCTAATTCCAATCCCAATCCTCACAATGCCAATGCGGCATCCCAGCTACCACGACCGCCGCCGTCCACGGCGGCCACCACCGCCGGCGCCGGCGCCTCTTCGTCCTCGCTCTTCCCGCGCTCCGGCGGGTCTCACCACCGGCGAGCCCACTCGGAGATGAGTTTCCGGCTGCCGGACGACTTGATGGACCTGTCGCCGTCGGATCCGTTCGCCGGCGGGTCATCAACGGCGAGCATGGAGGAGATCGGATCCGAGGATGACCTGTTCTCAACGTACATTGATGTGGACAAACTCGGAGGCTCGAACGGGTCGGGCACCGCCGGAAACGGAGCGGATCCGACCGGAGAACGGGAGAAGAGTCCCACGAGGGCGCGGCACCGGCACAGTAGTTCGGTCGATGGCTCTTCGTCGTTCGGCGAAATAATGGAAGCGAAGAAGGCTATGCCACCTGATAAGTTAGCTGAGCTATGGACAATTGATCCCAAGCGTGCTAAGAGAATACTTGCAAATCGGCAATCTGCTGCTCGATCCAAAGAGAGAAAAGCGCGTTATATACAAGAACTTGAGCGCAAGGTTCAAACTCTTCAGACGGAAGCCACAACTCTTTCTGCCCAGTTGACATTATACCAGAGGGACACAACAGGCCTGAGTACTGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAGCAGGCACAGCTTCGTGATGCCCTTAATGAAGCATTGAAAAAGGAAGTTGAGAGACTTAAGGTTGCTACTGGTGAGATGATGAGCCCCACTGAATCCTTTAATCTGGGAATGCACCATATGCCGTTTACAGGATCAACTTTCGGTTCAATCCCGTCACAATCAGGTCCTTCTGGTCACCAGAACATCCAGTTGTCACCATTTGGTCACTCCCCATCCACAATGCGGACTCATCAACTGCATCAAACAACTTCTCATCCACTTACAGATTTATTGCAAAATGACCAGCTTGGTCGTTTCCAGGGGCTTGACATTAGTAGCAAAGGATCAACTCTGGTGAAGACTGAAGGCCCCTCGCTTTCTGCAAGTGAGAGTAGCACTACATTTTGA 1935 0.4899 MGDHMNKDMQEKPILAALEDLYQGIPDESVNLTFQDLAEVNTSEKRKPTATSTTTTIAPSSSLAKLPSLDFTKGLQGCSQHRVQDFGYGESSPWDYPGHFSHHAGGGAQRQIPQCMANGDDHSKYGVSFDGVSVASGRATRRRRPGIPHSKICATCNTYIYLFRTRCLVCGRVYCRQCVEIGMGEMVEGRKCIECLGLRFSHRYIERAGNVGCCSWRYPKTLKQVELKCAEKGPRRSGKYGHSGMPNSRSLSPNKWRESRKRVQLCCVTKLQAFAKQMQDPSSNPNSNPNPHNANAASQLPRPPPSTAATTAGAGASSSSLFPRSGGSHHRRAHSEMSFRLPDDLMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLGGSNGSGTAGNGADPTGEREKSPTRARHRHSSSVDGSSSFGEIMEAKKAMPPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNEALKKEVERLKVATGEMMSPTESFNLGMHHMPFTGSTFGSIPSQSGPSGHQNIQLSPFGHSPSTMRTHQLHQTTSHPLTDLLQNDQLGRFQGLDISSKGSTLVKTEGPSLSASESSTTF 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00239 644 MobiDBLite consensus disorder prediction 277 364 - -
Spst8g00239 644 Coils Coil 462 489 - -
Spst8g00239 644 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 444 507 IPR004827 GO:0003700|GO:0006355
Spst8g00239 644 Gene3D - 445 498 - -
Spst8g00239 644 MobiDBLite consensus disorder prediction 277 325 - -
Spst8g00239 644 MobiDBLite consensus disorder prediction 563 599 - -
Spst8g00239 644 CDD bZIP_plant_RF2 447 496 IPR044759 GO:0003700|GO:0006355
Spst8g00239 644 MobiDBLite consensus disorder prediction 400 414 - -
Spst8g00239 644 SUPERFAMILY Leucine zipper domain 446 497 IPR046347 GO:0003700|GO:0006355
Spst8g00239 644 MobiDBLite consensus disorder prediction 233 257 - -
Spst8g00239 644 SMART brlzneu 442 506 IPR004827 GO:0003700|GO:0006355
Spst8g00239 644 Pfam bZIP transcription factor 446 501 IPR004827 GO:0003700|GO:0006355
Spst8g00239 644 MobiDBLite consensus disorder prediction 624 644 - -
Spst8g00239 644 CDD FYVE_like_SF 153 195 - -
Spst8g00239 644 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 281 604 - -
Spst8g00239 644 Coils Coil 510 541 - -
Spst8g00239 644 MobiDBLite consensus disorder prediction 384 421 - -
Spst8g00239 644 FunFam probable transcription factor PosF21 445 498 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00239 Spst-Chr8 2031426 2038811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00239 278 644 bZIP Transcription Factor Family AT2G40620 52.217 5.70e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst8g00239 bZIP_1 9.5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00239 - - vra:106763153 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00239 8 2031426 2038811 Spst8g00239 8 2031426 2038811 ECH
Spst6g00204 6 2050345 2052266 Spst8g00239 8 2031426 2038811 PCT