Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00234 ATGGGAGAACATTGTTATGTAGAAACCGACCCAACTGGTCGCTATGGAAGGTTTGGAGATATTCTTGGAAAAGGGGCAATGAAGACTGTGTACAAAGCAATTGATGAGGTTCTTGGCATTGAGGTAGCATGGAACCAAGTCAGACTCAATGAGGCGCTTCGCACCCCGGAAGATTTGCAGAGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCACCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGAAAACCGGGCCTTCAACTTTGTCACAGAATTGTTCACATCAGGGTCACTGAGAGAATACAGGAAGAAATATAATCGTGTCAGCATACAAGCTATAAAGAATTGGGCTCGCCAAATCTTACAAGGTCTTGTTTATCTACATGGGCACGATCCACCAGTGATCCATAGGGACCTTAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGACTTGCTGCAATTCTCCGTGGTTCCCAATCAGCACACAGTGTTATAGGCACCCCTGAATTCATGGCTCCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTGTATTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCATATAGCGAATGTTCTAATCCAGCACAAATCTACAAGAAAGTGACATCGGGAAAACTACCAATGGCGTTTTTCCGGATTGAAGACATGGAAGCACAAAAGTTTATTGGAAAATGCTTACTACCTGCAGAAAAGAGGCCGTCGGCGAAAGAATTGTTGCTTGACCCGTTTCTTGTGTCTGATGATCCATCATCAACGACAAAATTTGCAATTCAGAAGCCATTTTTAAATGCCACTGAGATGGAGAAACTACAATTAAGTGATGATCTTCCTAGGACTGGAATGAAAGTGATAGGGAAACTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAGGATGGTTCTGTAAGGAATGTATTCTTTCCCTTTGACATTTTCAATGACACCCCTGTTGATGTTGCAACTGAAATGGTGAAAGAGTTGGAGATTGATGATTGGGAACCTTTTGAGATTGCAAATATGATTGATAGAGAGATATCTGCTCTGTTACCTCACAGGAGGCAAAGTAGCAGTTCAGATGCCTTCCACACATTCAGCTATATAGATGGTGATTGTGATGATGACGATGCAACTCAACATCACTTTCGCTCGTTCTCTTCAAGTTCATCATTCCAGGAATCACTGCCAGATTTTGTCAAAGCTGAGGAAATATCAAGTGGGTATTATTGGCTCCATGATGATTCGCATGACGATACCAGTTCACGATGCTCTTCACAAGGGACATATTCCAACTTGAATTATTATTCTGTAGATGATCATCAAGATCAGTACAACGTGCCTTCTTTGAGAAAAGATAAACTTCCCATCATAAAGAGTCACAGCAAGGGAAAAAAGGTTTCCCCTGGCGAAGACTTAAGCAATCTCAACCACTTTAAACTCATGGTAGGATCACAGGTTCCTTTTACTAGTAAAAATAAGATAGTGATGAATAACAGCAGATTAACAAGGAACAGATCATTGATTGATCTAAGGAGCCAACTATTACACCGATCACTGGTTGAAGAGGTAAATAAAAGAAGGTTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGGTTTCAGGCACCTTGTGATGTTACCACAAAAAGGTCACAGCATGTATCTGCTGCTCCAAATGAGAAATCTTCCAGGAAGGGCAAGGGGAAAAAATAA 1815 0.4072 MGEHCYVETDPTGRYGRFGDILGKGAMKTVYKAIDEVLGIEVAWNQVRLNEALRTPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVENRAFNFVTELFTSGSLREYRKKYNRVSIQAIKNWARQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQKFIGKCLLPAEKRPSAKELLLDPFLVSDDPSSTTKFAIQKPFLNATEMEKLQLSDDLPRTGMKVIGKLNPEDDTIFLKVQISDKDGSVRNVFFPFDIFNDTPVDVATEMVKELEIDDWEPFEIANMIDREISALLPHRRQSSSSDAFHTFSYIDGDCDDDDATQHHFRSFSSSSSFQESLPDFVKAEEISSGYYWLHDDSHDDTSSRCSSQGTYSNLNYYSVDDHQDQYNVPSLRKDKLPIIKSHSKGKKVSPGEDLSNLNHFKLMVGSQVPFTSKNKIVMNNSRLTRNRSLIDLRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQAPCDVTTKRSQHVSAAPNEKSSRKGKGKK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00234 604 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00234 604 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00234 604 SUPERFAMILY Protein kinase-like (PK-like) 17 301 IPR011009 -
Spst8g00234 604 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00234 604 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 478 - -
Spst8g00234 604 FunFam Probable serine/threonine-protein kinase WNK1 1 97 - -
Spst8g00234 604 Gene3D - 318 391 - -
Spst8g00234 604 MobiDBLite consensus disorder prediction 583 604 - -
Spst8g00234 604 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Spst8g00234 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Spst8g00234 604 Gene3D Transferase(Phosphotransferase) domain 1 99 280 - -
Spst8g00234 604 FunFam probable serine/threonine-protein kinase WNK9 99 279 - -
Spst8g00234 604 CDD STKc_WNK 14 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00234 Spst-Chr8 1986487 1990157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00234 6 583 MAP Kinase Kinase Kinase AT5G58350 59.044 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst8g00234 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00234 K08867 - gmx:100272203 1064.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00186 6 1935481 1939900 Spst8g00234 8 1986487 1990157 PCT