Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00233 ATGGGGAACAACAGGTTCAAGTTGTCAGATATGATGCCAAATGCTTGGTTTTACAAGCTAAAAGATATGAGCAGATCAAGGAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTATCTTCACCAACAACATCTCAAAGGTCGCTACCAAGATATTCACATTATTTCTCCACTGAGCCCATCAGAACTGGTAAGCTATTCAACACTCCTATTCACACCAAAGACTTGGAAATGCCATTCAATGATTCACCCAGAAGGTCATCCAAGAGAAGGGCTAGCAGAAAAACCATTTACAAGCCTTCTCCAACTGTTGTCTCTTCATCTTTCATACCAACTTCCAACTATGACTCCACCAATCACCGGATCAAGCCATACCAAGTTCAGTCACCAGATTATGATGTGTCTTCAGTTGAAAGCTCCTCCGAATCTGATCTCCATGAATATGCTTATTCTGAGTCCGAATGTGACAGTTTTTCTGTCCCTGATTTGCTCAATGGAATGGCCTCTAACTGCAGCTGCAGAGTTAGTTCCTCCACTAATGACATCATCATTGATATGAACAATGAGTCTTTCCTTGGGAACTCTGAAAAGCACGACGGGTTTGATGCAATTTCACAGCTAGGTCTTGCTCCAATATTGACAAAGCCAGTGAAGTTTGATGACAAGGTCATTGAAGCTACTGAGTTGAGAAGTTCAACTGAATGGGACGAGTTGCGGGATGATCAGTCTTTCTCAATTGAAATTAAAAAAGAGGAAGGCAATAGAAATCAAAGGAGGAGAACAAGCAATCATAGAAAGGCCTTTGCTAATTCTGCTGGCATAAGGCTTAGAATCAATTCTCCAAAACTTGCTAGCAGAAAAATCCAAGCCTGTGCAAGAAGGAGTGTGTCATCCACTGGAAACAAAGCTTCAAGGAGTACAGGTTTCCCAGATGGCTTTGCTGTTGTGAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAGTCAATGGTGGAGATGATTGTGGAGAACAACATCCGAGCATCGAAAGATTTGGAGGACCTACTTGCCCGCTACCTTTCCCTCAATTCAAGTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACTTGGCTCAACTTAGAATGTAA 1143 0.4164 MGNNRFKLSDMMPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTTSQRSLPRYSHYFSTEPIRTGKLFNTPIHTKDLEMPFNDSPRRSSKRRASRKTIYKPSPTVVSSSFIPTSNYDSTNHRIKPYQVQSPDYDVSSVESSSESDLHEYAYSESECDSFSVPDLLNGMASNCSCRVSSSTNDIIIDMNNESFLGNSEKHDGFDAISQLGLAPILTKPVKFDDKVIEATELRSSTEWDELRDDQSFSIEIKKEEGNRNQRRRTSNHRKAFANSAGIRLRINSPKLASRKIQACARRSVSSTGNKASRSTGFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLARYLSLNSSEYHDLIVKAFEQIWFDLAQLRM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00233 380 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Spst8g00233 380 MobiDBLite consensus disorder prediction 27 53 - -
Spst8g00233 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 114 376 IPR038933 GO:0045892
Spst8g00233 380 MobiDBLite consensus disorder prediction 35 53 - -
Spst8g00233 380 NCBIfam uncharacterized plant-specific domain TIGR01568 313 376 IPR006458 -
Spst8g00233 380 Pfam Transcriptional repressor, ovate 319 375 IPR006458 -
Spst8g00233 380 ProSiteProfiles OVATE domain profile. 315 374 IPR006458 -
Spst8g00233 380 MobiDBLite consensus disorder prediction 72 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00233 Spst-Chr8 1976783 1977925 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst8g00233 Ovate 8.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00233 - - gmx:100780926 655.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00185 6 1930710 1931855 Spst8g00233 8 1976783 1977925 PCT