Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00230 ATGAACCTTAAACTTGGTGAGGTATCAACCATTGTGGTTTCTTCTCCAGAAGTTGCCAAAGATGTCATGAAAACCTATGATGCCATCTTTGCTCAAAGACCCCATCAAGTTGGTGCAGACATCATATGTTATGGTTCCACCGACATTGCCACTGCCCCATATGGGGGCTATTGGAAGCAGCTAAGAAAAATATGCTCACAAGAGCTTCTAAGCAACACACGTGTGAGGTCCTTTCGATCACTAAGAGAAGAAGAAGTGAAGAATTTAGTAAGATATATTGAGACAAACAATGGTTCTTGTGTGAACCTCAGTGAGAAAGTGGCTTGCATGGCAAGTGCCATCATTGCAAGAGCAGCTTTTGGTGAAAAATGTAAGTACCAGGAAGAGTTCATTTCCCTTGTCAAGAAACTAGTGAAACTGGTCGAAGATGCCCTTGAATATCCTTTGACAATCGACAACATTAAGGCTGTAATGTTGAACATGTTTGGTGCTGGAACTGATACATTATCCGCAGTTATAGAATGGGCCATGTCAGAGATGCTGAAAAACCCGAAAGTAATGACCAAAGCTCAAGAAGAAGTTAGAAGAGTTTTTGGTAACCAAGGATACACCAACGAAGAATCACTTGAGGAACTAAAATTTCTGAAAGCAGTCATAAAAGAAACAATGAGATTGCACCCTCCTTTCCCTCTTCTTCTTCCAAGGGAATGTAGAGAAACTTGTGAGCTTAAAGGGTATACAATACCTGTTGGAACGAAAGTGATAGTGAATGCATGGGCAATTGCAAGAGACCCTGAGTATTGGACTGATGCAGAGAAGTTTTATCCCGAGAGATTCATGGATTGTATTTCTTTTGCGGTATATAATATTGAACTTTGCCTTGCACAACTACTTTACTATTTTGATTGGGAACTTCCAAATGGAAACAAGGAAAACCTGCAAATGACTGAAGCTTTGGGAGCCTATTCAAGAAGAAAAACAGATCTCATCTTAGTTCCCATTTCTTACAATCCTGTTCCTGTTTCATAA 1029 0.4004 MNLKLGEVSTIVVSSPEVAKDVMKTYDAIFAQRPHQVGADIICYGSTDIATAPYGGYWKQLRKICSQELLSNTRVRSFRSLREEEVKNLVRYIETNNGSCVNLSEKVACMASAIIARAAFGEKCKYQEEFISLVKKLVKLVEDALEYPLTIDNIKAVMLNMFGAGTDTLSAVIEWAMSEMLKNPKVMTKAQEEVRRVFGNQGYTNEESLEELKFLKAVIKETMRLHPPFPLLLPRECRETCELKGYTIPVGTKVIVNAWAIARDPEYWTDAEKFYPERFMDCISFAVYNIELCLAQLLYYFDWELPNGNKENLQMTEALGAYSRRKTDLILVPISYNPVPVS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00230 342 Pfam Cytochrome P450 2 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 Pfam Cytochrome P450 148 281 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 PANTHER OS08G0105600 PROTEIN 133 338 - -
Spst8g00230 342 SUPERFAMILY Cytochrome P450 3 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 Gene3D Cytochrome P450 144 328 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 Gene3D Cytochrome P450 1 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 PRINTS P450 superfamily signature 217 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 PRINTS P450 superfamily signature 164 181 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 PRINTS E-class P450 group I signature 5 31 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00230 342 PRINTS E-class P450 group I signature 257 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00230 Spst-Chr8 1949678 1951353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00230 1 335 Cytochrome P450 AT4G13290 36.000 1.26e-74 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00230 - K23807 gmx:100779851 432.565