Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00228 ATGCCAGAAACCGAAACTGCGGCCGCCGCGGGAGAGAGCACCGTCTTGTTCGAAAAATACGAGGTCGGAAGGCTCCTAGGATGCGGAGCGTTCGCCAAGGTGTACCACGCCCGCAACACCAAGACGGGGCAGAGCGTGGCGGTGAAAATCATAAGCAAGAAAAAACTAACCGGAACAGGGCTGGCCTCTAACGTGAAGCGCGAGATCGCCATCATGAGCCGTCTCCACCACCCTAACATAGTGAGACTCCACGAAGTGTTGGCGACCAAGACGAAAATCTACTTTATCTTGGAATTCGCCAAAGGTGGCGAGCTCTTCGCCAGAATTTCGAAAGGTCGATTCGGCGAGGATCTCGCGCGGCGATACTTTCAGCAGTTGATATCCGCCGTCGGGTACTGCCACGCGCGCGGCGTTTTCCACCGCGACTTGAAGCCGGAGAATCTCCTTCTGGACGAGCAGGCAAACCTTAAGGTCTCCGACTTTGGCCTCGGCGCGGTGAAGGAGCAGGTAGGGGTGGATGGGATGCTGCACACGCTGTGTGGGACTCCTGCTTACGTGGCACCGGAGATTTTGGCGAAGAGGGGCTACGACGGGGCAAAGGTTGATGTTTGGTCTTGTGGGGTTATTCTCTTTGTTCTTGTGGCTGGGTATCTTCCTTTCAATGACCCGAATCTTATGGTGATGTATAGGAAGATTTATAATGGGAATTTTCGGTGTCCAAGGTGGTTTTCGACGGAGTTAAGGAGGTTTCTGGCGAGGTTGTTGGATACGAATCCCGAGACGAGGATAACCGTTGATGAGATTTTGAAGGAGGCGTGGTTCAGAAAGGGGTACAAGGAGGTCACTTTTGGCGATTTAGGGTTGGAGTGGAAGAGTGAGGGTGATGAGGTGAAGGATTTGAACGCCTTTGATATCATTTCTTTCTCCACAGGGTTGAATCTCTCCGGTTTGTTTGACTCGTCGCGTGGGGTGGAAGAGGGAGAGAGATTTTTGCTGAAGGAGTCGCCGGAGAAAGTGGTGGAGAAGGTAGTGGCAGCGGCGGCCACGGTGGAGGGTCTTGTGGTGAGGAGGAGGAAGGAGTGTGGGGTGGAATTGGAGGGGTGTGACGGTAATTTCGCGGCTTTGGTGGAGGTTTACCGGTTAACGGGGGAACTGGTTGTGGTTGAGGTGAGAAGAAGGGATGGGAACGGTGGAGTTTTTAGAGATGTGTGGAGGAATAAGCTGAGGCCATATCTCTGTGCAGCCAGCAGCAGTACGACGTCGGATCGGGAGGAAACTGGTGCACAGCCGGTTGCAGGTGAATCATGA 1308 0.5382 MPETETAAAAGESTVLFEKYEVGRLLGCGAFAKVYHARNTKTGQSVAVKIISKKKLTGTGLASNVKREIAIMSRLHHPNIVRLHEVLATKTKIYFILEFAKGGELFARISKGRFGEDLARRYFQQLISAVGYCHARGVFHRDLKPENLLLDEQANLKVSDFGLGAVKEQVGVDGMLHTLCGTPAYVAPEILAKRGYDGAKVDVWSCGVILFVLVAGYLPFNDPNLMVMYRKIYNGNFRCPRWFSTELRRFLARLLDTNPETRITVDEILKEAWFRKGYKEVTFGDLGLEWKSEGDEVKDLNAFDIISFSTGLNLSGLFDSSRGVEEGERFLLKESPEKVVEKVVAAAATVEGLVVRRRKECGVELEGCDGNFAALVEVYRLTGELVVVEVRRRDGNGGVFRDVWRNKLRPYLCAASSSTTSDREETGAQPVAGES 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00228 435 CDD CIPK_C 301 413 - -
Spst8g00228 435 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00228 435 FunFam Non-specific serine/threonine protein kinase 10 303 - -
Spst8g00228 435 SUPERFAMILY Protein kinase-like (PK-like) 16 281 IPR011009 -
Spst8g00228 435 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00228 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Spst8g00228 435 Pfam NAF domain 299 356 IPR004041 GO:0007165
Spst8g00228 435 Gene3D Kinase associated domain 1, KA1 300 415 - -
Spst8g00228 435 Gene3D Transferase(Phosphotransferase) domain 1 11 299 - -
Spst8g00228 435 FunFam Non-specific serine/threonine protein kinase 11 99 - -
Spst8g00228 435 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 393 - -
Spst8g00228 435 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00228 435 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Spst8g00228 435 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00228 Spst-Chr8 1918491 1919798 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00228 1 421 CBL-interacting serine-threonine protein kinases AT2G30360 62.212 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst8g00228 Pkinase 1.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00228 - - gmx:100815088 727.628