Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00226 ATGTCTCCTATGAAGAACACATCAAACATCTTGATGCAAAAATATGAACTAGGTAGGTTACTTGGCAAAGGCACGTTTGGAAAGGTTTACTATGGGCGTAGTACAATAACTAACCAAAATGTGGCCGTTAAAGTGATTGACAAAAATAAGGTTATAAAAACAGGGCAAGCTGATCACATTAAAAGAGAAATATCTATCATGAGACTGATCAAGCACCCAAATGTTATTGAGCTTTTTGAGGTCATGGCCACTAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGAGAGCTGTTTGGGAAGGTGGCCAAAGGAAAGCTCAAAGAAGAAGTTGCACACAAATATTTTAGGCAGCTAGTGAATGCAGTGGATTTTTGTCACAGTAGAGGTGTAAGCCATAGAGATATAAAGCCAGAGAATATTCTGTTGGATGAAAATGATAATCTGAAGGTCTCGGATTTCGGGTTAAGTGCTCTGGCTGAATCCAAACATCAAGATGGCTTGTTGCACACAACTTGTGGAACACCTGCCTATGTTGCTCCCGAGGTCATCAAAAGAAAAGGTTATGATGGTGCCAAAGCTGATATTTGGTCATGTGGGGTAGTTTTGTTTGTCTTACTGGCAGGTTATCTTCCTTTTCAAGATCCTAATTTGATGGTGATGTATAAGAAGATAAACAAGGCAGAGTTTGCATGTCCTAAATGGTTCCCAGGAGTTCGGAGGCTATTGAGCAAGATGTTGGATCCGAATCCAGGCACTAGGATTTCCATAGATAAGGTTAAGCAATGTTCTTGGTTTAGGAAGTGGCCAAATGGTAGACAGACAACACAAGAAGGGGAAAACAGGAGTGTCTCTCCTTCAATTACGAATCATGCTGAGCAATGTGGTGATGGAAGTAACTGCTTAGCAGCAAAAGCAAGGCAAGAGCCAGTTGTGCCAGTAAGTATAAATGCCTTTGATATCATCTCCCTTTCACCTGGGTTTAATCTTTGTGGATTCTTTGAAGACAGTTTTCAGAAAAGGGAAGCAAGATTTTCTTCAAGACAACCAGCATCTCTCATTATCTTCAGGCTGGAAGAAATCGCCAAGCGGCTGAAGATGAAAATAAAGAAAAGGGCCGCGGGTTTGTTGAAATTGGAGGGCCTTCATGAAGGTAGGAAGGGGATCTTATCCATTGATGCAGAGATCTTTGAGGTTACTCCACTTTTGCACTTGGTGGAGGTGAAGAAATCAAATGGAGATACATTGGAATATGAGAAAATATTGAAAGAAGCCATAAGGCCTGCTCTTAAAGATATTGTTTGGGTTTGGCAAGGTGACCAACAACAGCAATCACAAGATTTGGATCAACCGCAGCAACAACAATCACAGTAA 1380 0.4072 MSPMKNTSNILMQKYELGRLLGKGTFGKVYYGRSTITNQNVAVKVIDKNKVIKTGQADHIKREISIMRLIKHPNVIELFEVMATKSKIYFVMEYAKGGELFGKVAKGKLKEEVAHKYFRQLVNAVDFCHSRGVSHRDIKPENILLDENDNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVIKRKGYDGAKADIWSCGVVLFVLLAGYLPFQDPNLMVMYKKINKAEFACPKWFPGVRRLLSKMLDPNPGTRISIDKVKQCSWFRKWPNGRQTTQEGENRSVSPSITNHAEQCGDGSNCLAAKARQEPVVPVSINAFDIISLSPGFNLCGFFEDSFQKREARFSSRQPASLIIFRLEEIAKRLKMKIKKRAAGLLKLEGLHEGRKGILSIDAEIFEVTPLLHLVEVKKSNGDTLEYEKILKEAIRPALKDIVWVWQGDQQQQSQDLDQPQQQQSQ 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00226 459 FunFam Non-specific serine/threonine protein kinase 6 94 - -
Spst8g00226 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Spst8g00226 459 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Spst8g00226 459 Gene3D Transferase(Phosphotransferase) domain 1 5 313 - -
Spst8g00226 459 Gene3D Kinase associated domain 1, KA1 314 438 - -
Spst8g00226 459 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Spst8g00226 459 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00226 459 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00226 459 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 433 - -
Spst8g00226 459 FunFam Non-specific serine/threonine protein kinase 313 437 - -
Spst8g00226 459 CDD CIPK_C 319 433 - -
Spst8g00226 459 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00226 459 FunFam Non-specific serine/threonine protein kinase 8 303 - -
Spst8g00226 459 SUPERFAMILY Protein kinase-like (PK-like) 11 290 IPR011009 -
Spst8g00226 459 Pfam NAF domain 315 373 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00226 Spst-Chr8 1908571 1909950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00226 4 445 CBL-interacting serine-threonine protein kinases AT5G58380 64.333 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst8g00226 Pkinase 5.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00226 - K07198 gmx:100779316 784.252