Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g00219 | ATGGAGATATCTTTGTTGAAGGTTCTATCTGATGCGATATCTTCATTTTTTCAATTACCATTTTCTGAAAAAATGAAGTTAGAACCTGTATCAAAATATTACCAAAAGGCAGAGAAGATGCTTAAGCTGTTGAAGCCTATTATTGATACTACTGTTTTTTCAGATATAGCTTCTAATGAAGTGCTCAGTAAACTATTTGAGGAACTTGGTCTGGCAGTTGATGAGTTGACAGAGCTTATTCTGAACTGGCATCCGTTATCTAGCAAATTTTACTTTGTTAATCAAGTTGAGCCCTTGATATCAACAATTCAGGCTTTGGGTCCCAGCATTTTACAACAGCTGAAGGATTCATCACAATGTCTCCCTGATAATTTGGGAAATGACACATCATCAACCATTCGAAAAGCTTTCATGGAACAACTGGAAGGGGTAGGACCAAGTTGGGAGGTCCTGGAAAACATTGCTGAGAACATGGGTCTAAGGTCTAATCAAGAGGTTCTGATTGAGGCTGTAGCCCTTGAAAAGTTGAAGGAGAAGGCTGAACAAATTGAACATACTGCAGAAGTTGAATATATTGATCAAATGATGTCAGTTGTAAATCGTATGCATGAGCATCTTGTTATTCTTAAGCAAGCTCATAGCTCTATCCCAGTGTCGGTACCTACTGATTTTTGCTGTCCTCTCTCTTTGGAATTGATGACAGATCCAGTAATTGTGGCATCAGGACAAACATATGAGCGGGCTTTCATCAAGAACTGGATTGACCTAGGTCTTACCGTTTGTCCAAAGACACGTCAGACGCTGGTTCACACCAATCTAATACCTAACTACACTGTAAAAGCATTAATTGCTAACTGGTGTGAAACACATGATGTGAAGCTTGTGGATCCCCTTAAGTCCAAAAGTTTAAATCAACCATCTTCCTTTCATGGTTCTATGGAGTCTGGTTTGACCAAGGATTCACCTGTTAATACTGGTCGGGAAACCCACCTAGAACGAACATCAACATTGCACCCCTCTTCTACTACAGGTGGTTCCTTAAACGGCACAGTTCATGAGCCATATGTGGATCATGAAAGAATCTCACACACAGGTTCAGATGATGGATCTGCCAGCTCAGATGAAGAAAGTGTGGATTCAGTTGGTGAATCATTAACATCACCATCTAGAAATGTCATGAGCTCAGAACAATCTCAAACTGATGTTAGGACTACTTCTGATAACAACAATACACCTCTGCTTTCAACCAGTTCGGTCCACAGTCGTGAAGCTTCTGGGGAATCAAATTCGGGGCCAGATGCTGTCGCCTTGCCAAATTGGCAAAGAGAATCTGAGTTTTCACCCCAATCAGCGGTGCCAAGGTCACGCCAAACTATATGGCAACGGTCATCCGAGTGGCTTGTTCCTAGGGTAGTGTCTACTCCTGTTGATACTAGAGCTGATCTGTCCGCTGCTGAAACTCAGGTTCGGACATTAGTGGAGCAGTTAAAGAGTGATTCTCTTGATGCTAAGAGGGAGGCAACATCAGAACTCCGCCTTCTTGCTAAGCACAATATGGATAACCGAATTGTGATTTCAAATTGTGGAGCCATTAGCTTATTAGTTGATTTACTGCAATCAATTGATACTAGGATCCAGGAAAATTCTGTTACAGCTCTCCTAAACTTATCAATCAATGATAACAACAAAGCTGCCATTGCAAATGCTGGTGCAATTGAACCTTTGATTCATGTCCTTAAGACAGGGAGTTCAGAAGCCAAGGAAAATTCAGCTGCCACGCTTTTCAGCCTCTCAGTTACTGAGGAAAACAAAATCAGGATAGGGAGGTCTGGGGCAATTAGACCACTGGTTGATTTGTTGGGGAATGGAACACCTAGGGGGAAGAAAGATGCTGCCACTGCTTTGTTTAATTTGTCATTATTTCATGAAAACAAGGATCGGATTGTGCAAGCTGGTGCTGTGAAACACCTTGTAGAGTTAATGGACCCTGCAGCTGGAATGGTCGATAAGGCTGTGGCTGTTTTAGCAAATCTTGCTACAATACCAGAAGGGAAAACAGCAATTGGTGGTGATCAAGGTATTCCTGTTTTGGTTGAGGTTATTGAGTTGGGTTCTGCTAGAGGAAAGGAGAATGCCGCAGCGGCTCTTCTACATCTATGCTCAGACAACCACAGATATTTAAACAGGGTGCTCCAAGAAGGAGCCGTGCCACCTTTAGTAGCATTGTCACAATCAGGCACCCCAAGGGCCAAAGAAAAGGCCCTTGCTCTCCTTAATCAATTTAGAAGCCAAAGACATGGTGGTGCTGGAAGAACTTGA | 2319 | 0.4239 | MEISLLKVLSDAISSFFQLPFSEKMKLEPVSKYYQKAEKMLKLLKPIIDTTVFSDIASNEVLSKLFEELGLAVDELTELILNWHPLSSKFYFVNQVEPLISTIQALGPSILQQLKDSSQCLPDNLGNDTSSTIRKAFMEQLEGVGPSWEVLENIAENMGLRSNQEVLIEAVALEKLKEKAEQIEHTAEVEYIDQMMSVVNRMHEHLVILKQAHSSIPVSVPTDFCCPLSLELMTDPVIVASGQTYERAFIKNWIDLGLTVCPKTRQTLVHTNLIPNYTVKALIANWCETHDVKLVDPLKSKSLNQPSSFHGSMESGLTKDSPVNTGRETHLERTSTLHPSSTTGGSLNGTVHEPYVDHERISHTGSDDGSASSDEESVDSVGESLTSPSRNVMSSEQSQTDVRTTSDNNNTPLLSTSSVHSREASGESNSGPDAVALPNWQRESEFSPQSAVPRSRQTIWQRSSEWLVPRVVSTPVDTRADLSAAETQVRTLVEQLKSDSLDAKREATSELRLLAKHNMDNRIVISNCGAISLLVDLLQSIDTRIQENSVTALLNLSINDNNKAAIANAGAIEPLIHVLKTGSSEAKENSAATLFSLSVTEENKIRIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSLFHENKDRIVQAGAVKHLVELMDPAAGMVDKAVAVLANLATIPEGKTAIGGDQGIPVLVEVIELGSARGKENAAAALLHLCSDNHRYLNRVLQEGAVPPLVALSQSGTPRAKEKALALLNQFRSQRHGGAGRT | 772 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g00219 | 772 | MobiDBLite | consensus disorder prediction | 335 | 349 | - | - | |
Spst8g00219 | 772 | SUPERFAMILY | ARM repeat | 489 | 761 | IPR016024 | - | |
Spst8g00219 | 772 | MobiDBLite | consensus disorder prediction | 375 | 435 | - | - | |
Spst8g00219 | 772 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 529 | 571 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | SMART | Ubox_2 | 223 | 286 | IPR003613 | GO:0004842|GO:0016567 | |
Spst8g00219 | 772 | MobiDBLite | consensus disorder prediction | 304 | 436 | - | - | |
Spst8g00219 | 772 | Coils | Coil | 163 | 183 | - | - | |
Spst8g00219 | 772 | FunFam | RING-type E3 ubiquitin transferase | 219 | 294 | - | - | |
Spst8g00219 | 772 | Gene3D | - | 470 | 767 | IPR011989 | - | |
Spst8g00219 | 772 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 201 | 297 | IPR013083 | - | |
Spst8g00219 | 772 | CDD | RING-Ubox_PUB | 221 | 273 | IPR045210 | - | |
Spst8g00219 | 772 | PANTHER | U BOX DOMAIN-CONTAINING | 29 | 760 | - | - | |
Spst8g00219 | 772 | Pfam | U-box domain | 220 | 290 | IPR003613 | GO:0004842|GO:0016567 | |
Spst8g00219 | 772 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 611 | 653 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | FunFam | RING-type E3 ubiquitin transferase | 473 | 767 | - | - | |
Spst8g00219 | 772 | ProSiteProfiles | U-box domain profile. | 219 | 293 | IPR003613 | GO:0004842|GO:0016567 | |
Spst8g00219 | 772 | SMART | arm_5 | 600 | 640 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | SMART | arm_5 | 722 | 763 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | SMART | arm_5 | 518 | 558 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | SMART | arm_5 | 559 | 599 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | SMART | arm_5 | 681 | 721 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | SMART | arm_5 | 641 | 680 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 652 | 693 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | MobiDBLite | consensus disorder prediction | 304 | 324 | - | - | |
Spst8g00219 | 772 | Pfam | Armadillo/beta-catenin-like repeat | 559 | 598 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | Pfam | Armadillo/beta-catenin-like repeat | 601 | 639 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | Pfam | Armadillo/beta-catenin-like repeat | 520 | 557 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | Pfam | Armadillo/beta-catenin-like repeat | 643 | 679 | IPR000225 | GO:0005515 | |
Spst8g00219 | 772 | SUPERFAMILY | RING/U-box | 209 | 297 | - | - | |
Spst8g00219 | 772 | ProSiteProfiles | Armadillo/plakoglobin ARM repeat profile. | 570 | 612 | IPR000225 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g00219 | Spst-Chr8 | 1861595 | 1864440 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g00219 | 180 | 771 | U-box Gene Family | AT2G23140 | 60.220 | 0.0 | 687 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g00219 | - | - | gmx:100777715 | 1222.22 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Spst6g00174 | 6 | 1851356 | 1857149 | Spst8g00219 | 8 | 1861595 | 1864440 | PCT |