Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00207 ATGCCTTCAACTGTCTTTCAATGGCTAAGTCTTGTGGGCATCATTTGGCTCCAATCCATAAATGGAACAAACACCAATTTCCCTGCTTACTCCTCACAGCTGAAGCATCTCCTTACCATCTCACAATTTCAGCTCAATAACCTTGCTTTTGCCTCTGATGCTGGAAAAGTTTTTGGCTTTTTTTCTGGCTTGGCTGCATTTTACTTCCCCCTTTGGCTAGTGCTCATGATTGGTTCAACTCTTGGGCTAATTGGCTATGGTGTACAATATCTCATCATAACAGAACAGATCTCCTCTCTCTCCTATTGGCATGTCTTCTTTCTAACAGTTTTAGCAGGAAATAGCATTTGTTGGATTAACACTGTCTGCTATGTCATCACAATAAGGAACTTCTCATATGATTGCCAAGTTGCTGTGGGGATAACAACTAGTTACCAAGGGTTGAGTGCTAAGATTTATACCAGCATTGTTGATGCAGTTGCTGGAAACAAAAGGGCCAAAACATTTCTCTTTCTAAACTCAGTCTTACCTGTGATAGTTAGCCTAATAGCAGCTCCTGTGGTTAGAGAAATAGAAGTCGTAAGGCCTAAACACATTAGTGTTGGATTTGTTCTTATGTTTGTTATAACAATTGCCACAGGAATTTATGCTGTGATGAGCAGCTTGGAATTTGTCTCCAGCAGAATATCTTCACTTGGGAACCTTATTGGTGTTCTAGTGTTCCTTCTCTTGCCTCTATTAGTTCCACTTTCCATGAAGATCCATGCACTAGTTGGGTCATGGCACAAAAATAGAGAAAAACAAAGAGTGTATAATTTTACTTCGGAGGATGGTCATAAAGAAGAGAGAATAGAGAATGAGGAGAAAGAAGGTGAAGAAGATAGTGGAGAAGTTCAAGACGTAGGTATGAGAGAAGAAGTAGGAGCAAAATTAATGGTGAGAAGAATAGATTTCTGGTTATACTTCTTTGTCTATTTGTTCGGTGCAACACTCGGTTTAGTGTTTCTGAATAACTTGGGGCAAATAGCTGAATCCCGGGGTTACTATAGAACTTCATCATTGGTGTCATTGTCTTCTTCTTTTGGATTCTTTGGCCGTCTCATGCCATCTATAGTGGACTACTTTTACAGGAATAAGTGTGCAATATCAAGACCTGCTTCTATGATGGTATTAATGGCTCCAACTGCAGGTGCATTTTTTTTACTTCTCAACAAGACTCACCTTGCCCTCTACGTTAGCACTGCCATAATTGGAGTGTGCACTGGGGCAATCACTTCAATCGCTGTGTCCACGACCACTGAGTTATTTGGAACCAAGAATTTCTCCGTGAACCATAATGTGGTGGTGGCCAACATTCCTGTGGGGTCCCTTTTGTTTGGCTACCAGGCTGCCATTGTTTACCATAAGGCAGGGAATGAAAATGGAAAATGCATGGGCATGGAATGCTACAGAAACACTTTCATCATATGGGGTTCCCTTTGTTTCTTTGGCACTTTTTTGGCTTGCATTCTACACGCTAGGACCCGCAAATTTTACTCACATAAGCTATAG 1551 0.4101 MPSTVFQWLSLVGIIWLQSINGTNTNFPAYSSQLKHLLTISQFQLNNLAFASDAGKVFGFFSGLAAFYFPLWLVLMIGSTLGLIGYGVQYLIITEQISSLSYWHVFFLTVLAGNSICWINTVCYVITIRNFSYDCQVAVGITTSYQGLSAKIYTSIVDAVAGNKRAKTFLFLNSVLPVIVSLIAAPVVREIEVVRPKHISVGFVLMFVITIATGIYAVMSSLEFVSSRISSLGNLIGVLVFLLLPLLVPLSMKIHALVGSWHKNREKQRVYNFTSEDGHKEERIENEEKEGEEDSGEVQDVGMREEVGAKLMVRRIDFWLYFFVYLFGATLGLVFLNNLGQIAESRGYYRTSSLVSLSSSFGFFGRLMPSIVDYFYRNKCAISRPASMMVLMAPTAGAFFLLLNKTHLALYVSTAIIGVCTGAITSIAVSTTTELFGTKNFSVNHNVVVANIPVGSLLFGYQAAIVYHKAGNENGKCMGMECYRNTFIIWGSLCFFGTFLACILHARTRKFYSHKL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00207 516 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 513 - -
Spst8g00207 516 MobiDBLite consensus disorder prediction 276 299 - -
Spst8g00207 516 Pfam Nodulin-like 7 250 IPR010658 -
Spst8g00207 516 SUPERFAMILY MFS general substrate transporter 208 510 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00207 Spst-Chr8 1756992 1758737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00207 1 515 Nodulin-like Gene Family AT2G30300 48.099 2.94e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00207 - - gmx:100808034 811.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00207 8 1756992 1758737 Spst8g00207 8 1756992 1758737 ECH
Spst6g00165 6 1774303 1776079 Spst8g00207 8 1756992 1758737 PCT