Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00206 ATGGAATCCCATGATGAAGAGCATGCTGCAAAACTACTTAGAGCTCAAAAACACGTATGGAATCATATTTTTAGCTTCATAACCTCCATGTCCCTTAAATGTATTGTTGAATTAGGCATACCAGACATCATACACAACTATGCCCAACCCATGTCACTCTCCAACCTCATGGCTTCCCTACCAATTCACTCTTCCAAAACTCACTCCATCCATCGCTTGATGCGAATCATGGTCCATTCTGGCTTCTTCTCTCAACACAGTGACACCCACAATGACCTAGAAGTCAAGTTTGCGCTTACTGATGCATCTTTACTTCTGCTTAAGAGTCATCCAATGAGTGTGACACCTTTCTTGCATTCCATGCTTGATCCAATTTTAACAAATCCGTGGAATCAGTTTTCTAATTGGTTCAGAAATGATGATCTGACACCATTTCAAACGGCACATGGGAAGTCGTTCTGGGAGTATGCTGGCAGTGATCTGAAAATGAATAACTTATTCAACGATGCCATGGCATGTGACTCTGAATTAGTCACTAGTTTGTTGATGGAAAAATTCAAAGGAGCGTTCATGGGATTGGAGACATTGGTTGATGTTGGGGGAGGTACAGGAACCATAGGGAAGGCCATTGCTAAATCCTTTCTTCAGTTGGAATGCATTGTATTTGATCTCCCACATGTTGTTGCTGGCCTGCAAGGAATTGAGAACCTTAAATACGTTGGAGGGGACATGCTTGAGACAATTCCTCCAGCTGATGCCATTCTGTTGAAGTGGATATTACATGACTGGAGTGATGAGAAGTGTGTGAACATATTGAAGAAATGCAAGGAAGCGATATCGAGGAAAGGCAAAGATGGAAAAGTGATTATCATAGAAATGGTGGTGGATAATGAGAAGAAAGATTTTGAATCAATTGAAACACAGCTCTTCTTTGATATGGAGATGATGGTGTTGGTGAAAGGAAAGAAGAGAAACGAGAAAGAATGGTCTACGCTTATTTCCTCCGCTGGCTTTAGTAACTACAAGATAACTCCCGTTTTGGGCTTAAGATCTCTCATTGAGACCTATCCGCAGTGA 1077 0.415 MESHDEEHAAKLLRAQKHVWNHIFSFITSMSLKCIVELGIPDIIHNYAQPMSLSNLMASLPIHSSKTHSIHRLMRIMVHSGFFSQHSDTHNDLEVKFALTDASLLLLKSHPMSVTPFLHSMLDPILTNPWNQFSNWFRNDDLTPFQTAHGKSFWEYAGSDLKMNNLFNDAMACDSELVTSLLMEKFKGAFMGLETLVDVGGGTGTIGKAIAKSFLQLECIVFDLPHVVAGLQGIENLKYVGGDMLETIPPADAILLKWILHDWSDEKCVNILKKCKEAISRKGKDGKVIIIEMVVDNEKKDFESIETQLFFDMEMMVLVKGKKRNEKEWSTLISSAGFSNYKITPVLGLRSLIETYPQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00206 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 357 IPR016461 GO:0008168
Spst8g00206 358 FunFam Coniferyl alcohol 9-O-methyltransferase 2 106 - -
Spst8g00206 358 Gene3D Vaccinia Virus protein VP39 107 357 IPR029063 -
Spst8g00206 358 Pfam O-methyltransferase domain 130 339 IPR001077 GO:0008171
Spst8g00206 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 354 IPR029063 -
Spst8g00206 358 PIRSF O-mtase 1 358 IPR016461 GO:0008168
Spst8g00206 358 PANTHER O-METHYLTRANSFERASE 13 342 IPR016461 GO:0008168
Spst8g00206 358 FunFam O-methyltransferase ZRP4 108 357 - -
Spst8g00206 358 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Spst8g00206 358 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Spst8g00206 358 Gene3D - 1 106 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00206 Spst-Chr8 1748562 1750024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00206 27 343 Monolignol Biosynthesis Gene Families AT5G54160 32.407 2.22e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00206 - K16040 gmx:100807238 578.17