Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00195 ATGTTTCAAAAATATACAAAAGGAATATTCTACGGCGACAACCCTTTAAACTACACGCTCACAGTGTTCACTTTACAGGCCTCCTTAGTATGTTTGTCCACCGCGTTCTTGCGATTCCTTCTCATCCCCCTCGGGGAGACTTCCTTCATTCCTCAAGTGCTGGCAGGGTTGCTATGGGGACCATCATTTTTGGGAAAAGTTGCCAACATTAGAAAGTGGATATTCGCCTCAAAACCTTTCTACTCGAGTGAGGCAATCTCTCTTTTCGGAACCATGATATTTCTGTTCTTGATGGGAGTGAAAACTGATCCATCCTTAGTGATGAGAACGGGGAAAAAGACTTGGGCCATTGGCTTGTGTTGTTGCCTATTGCCACACGTGTTTAGCATACCTTATGTTTTTATTCTAAGGCACATTTTGTCCCCGGAAACAGACGTGTACAAGTCCCTATATGTTATTGCAGCTTTTTCATCATCTATTTCTTTTCAAGTCACTGTCAGTCTTTTAGAAGACTTCAAGCTCCTAAATTCCGAGGTTGGTCGATTAGCAGTCTCTTCATCTATGGTAAGTGGAATTGTCAGTGCGATGTGGCAGAGCTTTATACTCACACGAAAACAAAGAAATGCGCACAACATCAGAGGAAGAGGTTCCCCAATGATGGCTATTTCTATGATTGTCATGGTGCTTATCATCCTGTGTATTTTGCGACCTATCATGTTATGGATGATACGGAAAACACCCAAAGGGAAACCCATCAAAGAGTCCTACATAGTTTCCATCTATGTGATGGTGTTGGGGTGTTCACTATTTGGAGAGTTCATTGGAAGGCACTACGTGTTTGGGCCATTGATTCTGGGCCTAGCAGTGCCAGAAGGTCCTCCTCTTGGATCAGCATTGGTAGAGAGGCTAGATACCTTGATCTCAGGACTATATATGCCAATGTTCTTCTTCGCTGCTAGTGCCAGATTCAAGCCCGATCTAGTTGATTTCTATAGCTTCAAAATTGTGCAGCCTTTGGCCATAACCAGCTTCTTTGGAAAGATTGTAGGAACCGTATTGCCCTCACTCTACTGCGATATGCCACTCACTGACGGAGTCTCCTTTGGTCTCATAATGAGTGCCCAAGGCATCACGCACTTGCTTCACTTGCAAAATTTACATTACTATCATATTATAGATGATAAATCGTACGCTCAAATGGTGATAGCTATGATATGGTTGACGGCAGCTTCCAATCCTATAGTGAAATACCTGTATGACCCATCTAAAATTTACTTGTCTATAGCAAAGAGGAGGACCGTTGAGCATTCTCCTACCGGCGTTGTACTTCCCTTGATGGCATGCATACACACTGAAGAAAACACCCCTCCCATGATCAATTTTCTAGAAATGTCCAACTCCACAGTTGAAAGTCCCATTTGGTTCCATGTCATACACCTGCTTAAACTGAAGGGTAGAGCAATCCCAGTTTTGATAGATCATCAACAGAATAGCAGGTCCATTCCATTGCACTCTGATGTTTCAAATAACATAATAAATGCATTTAAATCATACGAGCAACAAAAACCGGACAAAGTGGTGGTGAAAGTCTACACATCTATCTCCCCTTATGAGACAATGCACGATGAGATATGCTTGCAGGCTGCACATAAACAAGCCTGCATGTTGATTGTGCCTTTTCACAGGCAGTTTAGAAGAAGTGGGGTTATAGATTTACCAAACCCCATTAGAACATTGAACCGCCATTTGCTGAGAACCGCGCCTTGTTCCGTTGGGATCCTAGTTGAACGTGGGAGCTTGATTAGCAACAACGCTTTAACATCTACGTCCTTTTATAGTGTTGGAGTTCTGTTTATAGAAGGGCCAGATGACCGTGAAGCCTTGGCATATGCAATGCGCATGGCTGAGCACCCCAACGTAAAGGTCTCAGTAATTAGGTTAACAGAAACTCGTAGGAAAGTTAGACAGTTCCTCAACAGAGACCCTGACACTGAAATTTTGCACAAGTTTCTGGTTAACTACAGCCAAATAAAACGGCATGATTACAAAGAGGAAGTTGTAAGAGATAGTGTGGAAATGATTGGTATCATAAGGACATTCGAAGGTTGCTATGATTTGATTTTAGTGGGTAGACGCCACGAGGGTGAGTCCTCATTGTTTTATGGAATGACCGAGTGGATTGACTACCCAGAACTTGGCTCTGTAGCAGACATGCTGGTCTCTTCAGATTCTACATTTGATGGGTCTGTGTTGGTGGTGCAGCAACAAAATAAGGTAGGGGCTAATTTTGTTCATCATGATTTCCATCAAGAAAATTCTGTCAGCACGCAAGAACGAGCAAGCATGGATGTGCAGCCTCATAAAATGGTTATGCCAGTAGTTTAA 2385 0.4285 MFQKYTKGIFYGDNPLNYTLTVFTLQASLVCLSTAFLRFLLIPLGETSFIPQVLAGLLWGPSFLGKVANIRKWIFASKPFYSSEAISLFGTMIFLFLMGVKTDPSLVMRTGKKTWAIGLCCCLLPHVFSIPYVFILRHILSPETDVYKSLYVIAAFSSSISFQVTVSLLEDFKLLNSEVGRLAVSSSMVSGIVSAMWQSFILTRKQRNAHNIRGRGSPMMAISMIVMVLIILCILRPIMLWMIRKTPKGKPIKESYIVSIYVMVLGCSLFGEFIGRHYVFGPLILGLAVPEGPPLGSALVERLDTLISGLYMPMFFFAASARFKPDLVDFYSFKIVQPLAITSFFGKIVGTVLPSLYCDMPLTDGVSFGLIMSAQGITHLLHLQNLHYYHIIDDKSYAQMVIAMIWLTAASNPIVKYLYDPSKIYLSIAKRRTVEHSPTGVVLPLMACIHTEENTPPMINFLEMSNSTVESPIWFHVIHLLKLKGRAIPVLIDHQQNSRSIPLHSDVSNNIINAFKSYEQQKPDKVVVKVYTSISPYETMHDEICLQAAHKQACMLIVPFHRQFRRSGVIDLPNPIRTLNRHLLRTAPCSVGILVERGSLISNNALTSTSFYSVGVLFIEGPDDREALAYAMRMAEHPNVKVSVIRLTETRRKVRQFLNRDPDTEILHKFLVNYSQIKRHDYKEEVVRDSVEMIGIIRTFEGCYDLILVGRRHEGESSLFYGMTEWIDYPELGSVADMLVSSDSTFDGSVLVVQQQNKVGANFVHHDFHQENSVSTQERASMDVQPHKMVMPVV 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00195 794 CDD USP_Like 621 753 - -
Spst8g00195 794 Gene3D - 476 754 - -
Spst8g00195 794 Gene3D - 21 424 IPR038770 -
Spst8g00195 794 PANTHER CATION/H + ANTIPORTER 9 757 - -
Spst8g00195 794 Pfam Sodium/hydrogen exchanger family 34 410 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00195 Spst-Chr8 1633906 1636591 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00195 6 755 Antiporter Super Family AT2G13620 33.719 1.83e-136 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00195 K26731 - gmx:100790969 1082.01