Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00194 ATGGTACGCAAAACACCCAGAGGGAAACCCATCAAAGAGTCCTACATAATATCCATCTTTGTTATGACCTTGGGGTGTTCATTTGCTGGTGAGATGTTTGGAGAGCACTTCTTGATTGGGCCTGCTCTTCTGGGTCTGGCAGTGCCTGAAGGCCCACCACTCGGATCAGCATTGGTAGAAAAGCTAGAAACCATGGTCTCAACAGTACTCCTGCCATTGTTCTACTTCTCCGTGGGTGCCAAATGTGATCTCAGTCTAATCGATGCTCATAGCCTTGCAATTGTGCAGCCTGTGGCCATATTTTGCTTCATTGGGAAGGTGATAGGAACCCTGGTGGTTTCAATGTGGTGCAACATATCACTCGTTGATGCTCTCTCCTTAGGTCTTATTTTGAGTGCCTAA 402 0.4701 MVRKTPRGKPIKESYIISIFVMTLGCSFAGEMFGEHFLIGPALLGLAVPEGPPLGSALVEKLETMVSTVLLPLFYFSVGAKCDLSLIDAHSLAIVQPVAIFCFIGKVIGTLVVSMWCNISLVDALSLGLILSA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00194 133 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Spst8g00194 133 Pfam Sodium/hydrogen exchanger family 10 131 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst8g00194 133 Gene3D - 1 133 IPR038770 -
Spst8g00194 133 PANTHER CATION/H + ANTIPORTER 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00194 Spst-Chr8 1629396 1629797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00194 1 132 Antiporter Super Family AT3G17630 33.835 1.52e-20 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00194 8 1629396 1629797 Spst8g00194 8 1629396 1629797 ECH
Spst6g00153 6 1701759 1706680 Spst8g00194 8 1629396 1629797 PCT