Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00189 ATGCATGAATGTAATGATATTTTATCCACTCAGGATGTGTATTGTAAATGGCGGAGGGAAAGCTTAGAGGCGTGCTTATATGAGTTGCAAAAGATGGAGATAGATGAGAAGCGTACGAGGTTGCCATTAGATTGGTCTGTTGATAAGATATTGGTAAGAACATTTAAGGCTTCTCTTAGGATACTATTTCCTAGTGAGCGACGACTCTGTGATCGCGTCTTCTCTGGGTTCTCTGATGTTGCTGATTTCTGTTTCAGTGAGATTTGTCGGGGAGAAGTGGTTAAAATGCTGAATTTTGCTGTTGAGTATGCTAGCAAGGACCCTTGCGATGTGGGCTTGTCCAACATCGTTTTCATGTTTGAGACATCGTGTGATCTGATTCCTGAATTGCATTCATTGTTTCCAGAGTCCGTGGTAAAGGAAGCAGTGACAGTCCGCGACAAATTAGAAAAAACATGCAGAGACATTTTCATGAAAATGGAAGATAAGATTTTCTGCAACCCATTTGTGCAGGTAATAGTTCGGCCAGATGCCACGCATAATCCAATGACATGTTGTGTCATGGACTACTTGGAGTTGATTGTGGAACAATTCAGGAAGTTTGCTGGTAGAACAGGAATATCTTATTCTGTTTCTGATCTGATTAATCCAATAATGAAGCGATTGGAGAGAGAACTGGCGGCAAGGTCCAAAAACTACAAGTACCCTGCCTTACGCCACCTTTTCATTATGAATAATTGGAGGTACATAGAGGGAAGGGCAGCGAAATTGGGACTGCAAGATCTTGATTTTTTCCAAAATAGTGGGCCAATAGTTCGACAAAATCTCGTACTCTTTCAAAGAAACTCTTGGAATATGGTGTTAGATTTATTGAAGCTAGAGGATGATGAGTTAGTGGATGCAGAATCTATCAAAGACAAGTTGATAAATGAGCACATTGAGTTTATATGTAGTAATCAATCTACATGGCTCGCCTCTGCAGATCTCTTGAATGAGCAAAAGTTAATAATACCAGTTGTTGAGCACGGTAAAATTAACGAGGGTAACGAGTTTTTTTTTTTCACAATTTGGAAATAA 1077 0.3974 MHECNDILSTQDVYCKWRRESLEACLYELQKMEIDEKRTRLPLDWSVDKILVRTFKASLRILFPSERRLCDRVFSGFSDVADFCFSEICRGEVVKMLNFAVEYASKDPCDVGLSNIVFMFETSCDLIPELHSLFPESVVKEAVTVRDKLEKTCRDIFMKMEDKIFCNPFVQVIVRPDATHNPMTCCVMDYLELIVEQFRKFAGRTGISYSVSDLINPIMKRLERELAARSKNYKYPALRHLFIMNNWRYIEGRAAKLGLQDLDFFQNSGPIVRQNLVLFQRNSWNMVLDLLKLEDDELVDAESIKDKLINEHIEFICSNQSTWLASADLLNEQKLIIPVVEHGKINEGNEFFFFTIWK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00189 358 Coils Coil 291 311 - -
Spst8g00189 358 Pfam Exo70 exocyst complex subunit 53 324 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst8g00189 358 Gene3D Exocyst complex component Exo70 3 338 - -
Spst8g00189 358 SUPERFAMILY Cullin repeat-like 9 324 IPR016159 -
Spst8g00189 358 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 327 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00189 Spst-Chr8 1571525 1572601 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00189 13 339 EXO70 exocyst subunit family AT5G58430 35.933 3.03e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00189 K07195 - gmx:100788866 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00189 8 1571525 1572601 Spst8g00189 8 1571525 1572601 ECH