Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00188 ATGTCCGAAAACGGGGAAGAGAAGTTACTCGCTGTGGCGCGGCACATAGCGAAGACGCTGGGCCACAACAACACCATGTCTGATGACATTTTCCAAATATTGTCCAACTTCGATGGAAGGTTCTCGAGAGAGAATCTTTCTGAAAAGGGCGTAGATGCGGATTCCAGAGCCTGCGCTGCACTCGATCATTCTCTCAAATCCCTTGACCACCGGATCTCTCACTACGTCTCCACCGACCGTCCAATCTGGGCCGACGCTGCCCACGCCGCCGCCTTCCTCGACGCCGTCGACGAGCTCGTTGCCGTCGTCGCCGAGTGGAACCACCTCGCCTCCGATAAGTCCGTCGCCGCCTGCCTCGTACGCGCCGAAGACATGCTCCAGCACGCCATGTTCCGCCTTGAGGACGAGTTCCGCACGCTCATGGAGCGCGGCGGCGAGTCGTTCGGCCTCACTCGGAGCTACCGCAACGGTGAGTCCACGGAGAACATGCCCTTTGACTTGGATGAGGAGGACGAGGAGGATGACGATGCGAGAAACGGAGGTGACGAGGAGCAGATTCCGGTGGCGCTGCCGGTCACCGACTTCGACATCGTCATCGATGCGCTGCCGTCGGGGACGATCAATGACCTCCACGAGATCGCGAAGCGAATGGTGGCCGGCGGGTTCGGGAAGGAGTGCTCGCATGTGTACAGCAGTTGCCGGAGGGAGTTCCTGGAGGAGAGCGTGTCGAGGTTAGGGTTACAGAAGCTCAGCATCGAGGAGGTTCACAAGATGACGTGGCAGGACCTTGAAGATGAAATTGAGAAATGGATGAAAGCCTCCAACGTTGCTCTCAAGATCCTCTTCCCCAGCGAGCGGCGTCTCTGCGACCGCGTGTTCTTCGGATTCGCCTCCGCCGCGGATTTTTCCTTCATGGAGGTTTGCCGAGGATCCGCGATTCAGCTGCTGAATTTCGCCGACGCCGTCGCGATCGGAAGCCGGTCTCCGGAACGGCTGTTCAGAATCCTCGACGTGTTCGAGACGCTGCGTGACCTAATTTCGGAGTTTGACGCTCTGTTTTCTGATCAGTTCAGCGTGTCGCTCAGGAACGAAGCGATTACGATTTGGAAGAGGTTGGGGGAAGCGATTAGGGGCATTTTTATGGAACTGGAGAATTTGATTCGCCGGGATCCGGCGAAGATGGCGGTTCCCGGTGGCGGTCTTCACCCAATTACTCGCTACGTGATGAACTACCTCCGTGCGGCGTGCCGGTCACGGCAGAGCTTGGAGCAGGTTTTTGAAGACTACGGGCTGAAGGAGTACCCCAAGCTTGATGATAGAGTGCCCTCGTCTTCTTCTCTTTCAGTGCAAATGGATTGGATTATGGAGCTGCTAGAGAGCAATTTGGAAGCAAAGTCGAAGATTTACAAGGACCCTGCTTTGTGCTATGTTTTCTTGATGAATAATGGGAGGTACATTGTTCAGAAAACCAAAGATAGTGAATTGGGAACCCTCCTGGGTGATGATTGGATCAGAAAACACGCGGCAAAAGTTCGACAATTCCATGTGCACTATCAAAGAAGCTCGTGGAGTAAGGTACTCGGGATTCTGAAGCTGGATAGTAATGTTTCACTACCCCCTAATGGATTATTGGCAAAGTCAATGAAGGAGAAGCTCAAGTTGTTTTATTCGATGTTTGAGGATATTTGCAAGGAACAGTCTTCATGGTTTGTTTGTGATGAACAGCTAAGGGAAGAAATAAGAATTTCGCTTGAGAAAATCTTGTTGCCTGCATATGGAAACTTCGTAGCGAGGTTCGCGAATCTTTCAGAGAATGGTAAGCATGCTGATAAGCATATAAAGTATGAAACAGAGGACATTCAAGCAAGACTCAATGAATTGTTTCAGGGATCAAGTGGTAGCCGAAAGTGA 1911 0.5259 MSENGEEKLLAVARHIAKTLGHNNTMSDDIFQILSNFDGRFSRENLSEKGVDADSRACAALDHSLKSLDHRISHYVSTDRPIWADAAHAAAFLDAVDELVAVVAEWNHLASDKSVAACLVRAEDMLQHAMFRLEDEFRTLMERGGESFGLTRSYRNGESTENMPFDLDEEDEEDDDARNGGDEEQIPVALPVTDFDIVIDALPSGTINDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESVSRLGLQKLSIEEVHKMTWQDLEDEIEKWMKASNVALKILFPSERRLCDRVFFGFASAADFSFMEVCRGSAIQLLNFADAVAIGSRSPERLFRILDVFETLRDLISEFDALFSDQFSVSLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKMAVPGGGLHPITRYVMNYLRAACRSRQSLEQVFEDYGLKEYPKLDDRVPSSSSLSVQMDWIMELLESNLEAKSKIYKDPALCYVFLMNNGRYIVQKTKDSELGTLLGDDWIRKHAAKVRQFHVHYQRSSWSKVLGILKLDSNVSLPPNGLLAKSMKEKLKLFYSMFEDICKEQSSWFVCDEQLREEIRISLEKILLPAYGNFVARFANLSENGKHADKHIKYETEDIQARLNELFQGSSGSRK 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00188 636 MobiDBLite consensus disorder prediction 163 180 - -
Spst8g00188 636 PANTHER EXOCYST COMPLEX PROTEIN EXO70 59 630 IPR004140 GO:0000145|GO:0006887
Spst8g00188 636 FunFam Exocyst subunit Exo70 family protein 76 636 - -
Spst8g00188 636 Gene3D Exocyst complex component Exo70 82 636 - -
Spst8g00188 636 Pfam Exo70 exocyst complex subunit 269 626 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst8g00188 636 SUPERFAMILY Cullin repeat-like 83 628 IPR016159 -
Spst8g00188 636 MobiDBLite consensus disorder prediction 151 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00188 Spst-Chr8 1556120 1558030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00188 1 636 EXO70 exocyst subunit family AT5G58430 69.279 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00188 K07195 - gmx:100803694 1090.1