Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00187 ATGAAGGGACTCTACAGAGACGTTCCTCAAGCGGATCCACCCCAAACAATTATCATCGGTACTGGTAATACTTGTCCACAACCAGTAATTGATCTTGTTTGGCCTTCAAGAGGAACAACTCGTAGTGCTTCTCAAATAGTTTCACCTCAAGAGCGTGCTGGTGTTGCTGCCCCTCCAGAAAACATTGACAGCCCCATGGCATGCTTCATGGATTGTATAGAGGCTCTTAAGAAGGAGAATGGGAGCGTTATCAGCACAATTTCCAGGCATGTAGACAAATACCTTAAAGCTAATGTTCTCAGTGAGGACCGGATTTCAGTGCCAAAATTGCATGGCGACGACAACATAATGGTGGATTCATTGTCGTCAGGAATTATCATCCTTCGTGAACGTGCAAAGAACATGGTGTTAGATGGATTTCAGAAGGAATGCTTAGACGTGTACAGTAATTGGCGGAGGGATTTTCTGAAAGAGAGTCTATTGACATTAGGGTTGCAGGATCAAGAGTTCAACATGGAGGACAATAACAACATGGAGAAGATTGAGAAGTTGATAAAAGCTATGAACGTAGCTGCGAGGATACTCTTTCCCAATGAGAGGAGACTCTGCGATCTTGTCTTTGGCGGCTCCATTTGGAAGTTTCATTTCAGAGAATTTTGCACGGATTTAGCAACCAGTCTACTGAACTCTGCCCTTGCCTTGCCAACTTGGAGCCATTTTATGCGCAACACATTGCAGGAGTTGATACAAGAGTTTCAGTCATATACAACACTCGTAAATAGTACAGTGTTCGTGGTAAGACAGAGATTGTGCCTTCAAGAGACTTTGGAAGATGTAACACTCATTCCCTGTGGCGGGCTTCATCCTATTACCCTTGAAGTGATGTACTATCTTTACTCTGATTACAAAAATAAGGAAATTAGCACACTTAGCCAAGCTTTAGAGGAGGGAAAGATTTCATCGACTGTGTACATGGCTAGAGTGGCAGAACTGTTAAAGAGTAGTTTGGAAGCCAAGTCCAAAAATGCCAATAAGTTTGAACTGATGTACTACATTTATTCTCTTCGCCGAAGTAGGGAGAGTAAACTTAGCCAAGGTTTAGAACAAGAAAAGTTTTTTTCGCCTGAGTGCAAGGCCAGGACATTAGAGCTTTTAGAGAGCAGTTTGGAAGCCAACTCCAAAAATTACAATAACCCTACTTTGGGTTATGTTTTCATCATGAACAACCTAAGATTCATAACAGTAGAGACAAAACTGAATGGATTGGAACCTATTTTTGGCGATGACTGGCTCCAGAAAAATACAACAAAATTCCAACAAAACCTTGAACTCTATCAAAGAAGCTCATGGAATAAGATTGTGGACTTTTTGAAGCCGGACATCAATCAGCTAGAGCCTAGTGTTGCAGCCGAGTTGATGAAAGATAACCTTCATTGGTTCAGTGAACACTTTGATGAGACATGCAACGTTCAGTCTGCATGGTCTATCTGTGATGAGGAATTAAGGGAGCAAATAATAAAATCCATAGAAAACATCCTGTTGCCAGCATATGGAAATTTCCTCAGGAGATTTGAGGAACTTATTGGGAAGCATGCTTATGAGTACATTCAATATGGAATGTTTGAGGTTCAAGATCGACTCAACAGATTGTTTCTTGTAAGGGAGTAG 1668 0.4143 MKGLYRDVPQADPPQTIIIGTGNTCPQPVIDLVWPSRGTTRSASQIVSPQERAGVAAPPENIDSPMACFMDCIEALKKENGSVISTISRHVDKYLKANVLSEDRISVPKLHGDDNIMVDSLSSGIIILRERAKNMVLDGFQKECLDVYSNWRRDFLKESLLTLGLQDQEFNMEDNNNMEKIEKLIKAMNVAARILFPNERRLCDLVFGGSIWKFHFREFCTDLATSLLNSALALPTWSHFMRNTLQELIQEFQSYTTLVNSTVFVVRQRLCLQETLEDVTLIPCGGLHPITLEVMYYLYSDYKNKEISTLSQALEEGKISSTVYMARVAELLKSSLEAKSKNANKFELMYYIYSLRRSRESKLSQGLEQEKFFSPECKARTLELLESSLEANSKNYNNPTLGYVFIMNNLRFITVETKLNGLEPIFGDDWLQKNTTKFQQNLELYQRSSWNKIVDFLKPDINQLEPSVAAELMKDNLHWFSEHFDETCNVQSAWSICDEELREQIIKSIENILLPAYGNFLRRFEELIGKHAYEYIQYGMFEVQDRLNRLFLVRE 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00187 555 PANTHER EXOCYST COMPLEX PROTEIN EXO70 349 551 IPR004140 GO:0000145|GO:0006887
Spst8g00187 555 SUPERFAMILY Cullin repeat-like 127 348 IPR016159 -
Spst8g00187 555 Gene3D Exocyst complex component Exo70 60 353 - -
Spst8g00187 555 Gene3D Exocyst complex component Exo70 354 555 - -
Spst8g00187 555 Pfam Exo70 exocyst complex subunit 185 548 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst8g00187 555 SUPERFAMILY Cullin repeat-like 377 551 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00187 Spst-Chr8 1550563 1553385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00187 103 551 EXO70 exocyst subunit family AT5G58430 34.959 1.40e-66 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00187 - K07195 vra:106763388 701.049