Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst8g00178 | ATGTATATTGCTAGATCTGTCACATTACCGTTTCCCAACTCTTCATCCATTTCATTCAAATTACCCTTCCTCCTCCAATCCTGTGCCCTAATCTATTCTCCCAACGCCCCTCCCTCACATTCTCTTCTCATTGTCAACACTCTTTTCAGTGTAACGGAAATGGAGAAGTATGAGAAACTGGAGAAGGTGGGAGAAGGAACCTACGGGAAAGTGTACAAGGCACGTGAGAAAGCTAGCGGCAACGTGGTGGCGCTGAAGAAGACGCGGCTGGAGATGGACGAGGAGGGTGTACCTCCGACGGCCCTACGAGAGGTCTCGCTCCTGCAACTCCTCTCCCAATCCATCTACATCGTGCGTCTCCTTGCCGTCGAACATGTCGACAAGGTTCCCAAGGCTCACAAGGCCTCCTCCAACCCCCTCACCAAACCCATCCTCTACCTTGTCTTCGAGTACCTTGACACCGACCTCAAGAAGTTTATCGATTCCCATCGCAAGGGCCCTAACCCTAGGCCCCTCCCTCCTCAACGTATTCAGAGTTTTCTGTTCCAGCTCTGCAAGGGCGTGGCGCACTGCCATAGCCATGGTGTCCTCCACCGCGATCTCAAGCCCCAGAACCTTCTCCTCGACCAGCAGAAGGGGATTCTCAAGATCGCTGATCTGGGCCTCGGCCGCGCCTTCACCGTTCCTCTCAAGAGCTACACGCATGAGATTGTTACTCTTTGGTACAGAGCGCCTGAGGTTCTCCTTGGCTCCACGCATTACTCCACCGGGGTTGATATCTGGTCTGTTGGCTGCATCTTTGCTGAAATGGTGAGAAGGCAAGCGCTTTTTCCTGGGGATTCTGAGTTCCAGCAGCTAATGCACATATTCAAGATGTTGGGGACTCCAACGGAGGAGCAATGGCCAGGAGTTACTTCTCTGCGTGATTGGCATGTGTACCCGCGGTGGGAACCTCAGAATTTGTCAAGGAATGTACCTACCTTAGGACCTGATGGAGTGGACCTTCTCTCGAAAATGCTCAAGTATAACCCTTCTGAGAGAATATCTGCAAAGGCAGCACTGGATCATCCCTACTTTGATAGTCTGGACAAATCTCAATTTTAG | 1104 | 0.5172 | MYIARSVTLPFPNSSSISFKLPFLLQSCALIYSPNAPPSHSLLIVNTLFSVTEMEKYEKLEKVGEGTYGKVYKAREKASGNVVALKKTRLEMDEEGVPPTALREVSLLQLLSQSIYIVRLLAVEHVDKVPKAHKASSNPLTKPILYLVFEYLDTDLKKFIDSHRKGPNPRPLPPQRIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQQKGILKIADLGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTGVDIWSVGCIFAEMVRRQALFPGDSEFQQLMHIFKMLGTPTEEQWPGVTSLRDWHVYPRWEPQNLSRNVPTLGPDGVDLLSKMLKYNPSERISAKAALDHPYFDSLDKSQF | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst8g00178 | 367 | FunFam | Cyclin-dependent kinase B2,2 | 53 | 153 | - | - | |
Spst8g00178 | 367 | SMART | serkin_6 | 57 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g00178 | 367 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 366 | - | - | |
Spst8g00178 | 367 | FunFam | Cyclin-dependent kinase 2 | 155 | 366 | - | - | |
Spst8g00178 | 367 | PANTHER | CELL DIVISION PROTEIN KINASE | 54 | 359 | - | - | |
Spst8g00178 | 367 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 196 | 208 | IPR008271 | GO:0004672|GO:0006468 | |
Spst8g00178 | 367 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 153 | - | - | |
Spst8g00178 | 367 | ProSiteProfiles | Protein kinase domain profile. | 57 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g00178 | 367 | Pfam | Protein kinase domain | 57 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst8g00178 | 367 | ProSitePatterns | Protein kinases ATP-binding region signature. | 63 | 86 | IPR017441 | GO:0005524 | |
Spst8g00178 | 367 | SUPERFAMILY | Protein kinase-like (PK-like) | 51 | 362 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst8g00178 | Spst-Chr8 | 1476702 | 1479989 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst8g00178 | 54 | 367 | Core Cell Cycle Gene Families | AT3G54180 | 82.166 | 0.0 | 539 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-Pl | Spst8g00178 | Pkinase | 1.1e-65 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst8g00178 | K07760 | - | gmx:100805119 | 604.749 |