Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00162 ATGACCATGAATGGCCACAGCCACCATACTGTGCACATCGCTAACAGCACGAACCCTAACGACGAAGACGACGACGACAACGCATTCTCTCGCTCCTCCTCCTCCGCCGCCGACGACAACAACAACCACCGTGAAGATGACGACGAAGAACTCGTGGATCCTGACGATCCTTTCGACATTACTCACACGAAGAACGTCTCGCATGACACGCTTCGCCGTTGGAGACAAGCAGCGCTCGTGCTCAATGCTTCCAGGCGTTTTAGATATACTTTGGACTTGAAAAAGGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCACTGCTTTTCAGATTGGCCGGTGAACGTGAACTAGTGATAAGTACAGCAGTGTCACCCCCGACTCCCGTTGGTGACTATGATATTGGGCTCGAACAACTTGTTTCAATGTCTAAGGATCAGAATATTTCTGCTTTACAACAATATGGAGGGATTCGAGGCTTATCAAATTTAATAAAATCTAATCCGGATAAAGGTATAAGTGGAGATGATGCTGATCTGTTAAAAAGGAAAAATGCATTTGGAACAAATACATATCCTCGGAAAAAAGGAAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAGGATCTGACTCTCATAATATTGATAATAGCTGCTGCGGTGTCATTGACACTTGGAATAAAAACAGAGGGTTTGGCAGAAGGATGGTATGATGGGGGAAGCATTGCTTTCGCAGTTTTGCTTGTCATTGTAGTTACAGCCGTCAGCGATTACCGGCAATCTCTGCAGTTTCAGAATTTGAATTCAGAAAAACAAAATATACAACTGGAGGTTATTAGAGGCGGGAGAACAATTAAAATGTCAATATTTGATGTTGTTGTTGGTGATGTTATACCCCTAAAAATAGGAGATCAGGTTCCTGCAGATGGAGTATTAATCACGGGCCATTCACTCGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATAGTTCATAAGGATCACAAAACACCATTTTTGATGTCTGGTTGCAAAGTAGCGGATGGAGTTGGTGTTATGCTGGTAACTGGTGTTGGTATAAATACCGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGACACTGGAGAAGAGACTCCGTTACAGGTACGCTTGAATGGAGTAGCAACTTTTATTGGTGTAGTTGGTCTTAGTGTAGCTGTTTTAGTGCTTGCTGTCCTCTTGGGCAGATATTTTTCTGGCCATACCAGAGATATAGAGGGAAATGTTGAATTTGTTGCCGGAGAGACTAGTGTTGACAATGCAGTAGATGATGTCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTTGTTGCAGTGCCTGAAGGTCTGCCTCTAGCCGTTACCTTAACCTTGGCATACTCAATGCAGAAAATGATGGCAGACAAGGCCTTGGTACGGCGGCTGTCAGCCTGTGAAACTATGGGCTCTGCCACAACAATTTGCAGTGATAAGACAGGAACATTGACTTTAAATCAGATGACTGTGGTTGAGGCTTATGTTGGGAGCACAAAAGTAAATCCACCAGACGACTCATCAAAATTGCATCCAAAAGCATTGTCTCTTATAAATGAGGGCATTGCACAGAATACATCGGGAAATGTTTTTGTACCTAAGGATGGTGGAGAGGTTGAGGTGTCTGGATCTCCTACAGAGAAGGCCATTCTTTCATGGGCTGTCAAGTTGGGAATGAATTTTGATGTTATCAGATCAAATTCAAAAGTTCTCCATGTATTCCCCTTCAATTCTGAGAAAAAGCGAGGTGGTGTTGCTTTGAAACTGGGGGATTCTAAAGTACATATACATTGGAAAGGAGCTGCAGAGATAGTTCTAGGAGCATGTACTCACTATCTTGACTCAGATGGTCAATTGCAATCCATTGAAGAGGAGCAGGAATTTTTCAAGAAATCTATTGATGACATGGCTGCCCGCAGCTTGCGTTGTGTAGTCATTGCATACAGGTCATATGAACTACGCAAAGTTCCATCTAGTGAGCAGGAGTTAGACCAATGGTCTTTACCGGAAGATGAGCTTGTGTTGCTTGCTATCGTTGGAATAAAGGATCCTTGTCGCCCTAGTGTCAAAGATGCTGTAAAATTATGCTCTGATGCTGGTGTTAAGGTACGCATGGTTACTGGAGACAATCTCCAAACAGCAAAGGCAATAGCTTTGGAGTGTGGAATACTGGCTTCAAATGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGATATTGCCAAGAAAATAACTGTCATGGGGAGGTCTTCTCCAAATGACAAGCTTTTGCTTGTGCAAGCGCTACGTAAAGGAGGGGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGTCTTTGAATGCCCAAAGCCTGTGGTGAATTTCAAGTTTTCTGTTATTAATGTTCCCTCCGTTCTGGATGTAACAATAATTACTTTCGATCTAACATTTGGAATACAAATGCAATTAGTGGTGATTAGTGATGATGTTCTTTCTGCAGATATTGGTCTTTCTATGGGCATTCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTAGATGATAACTTTGCATCAGTAGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCAAATATTCAGAAATTTATTCAGTTTCAGCTTACAGTTAATGTTGCTGCCCTTGTAATAAATGTCGTGGCAGCAATAACTTCGGGTGACGTTCCTCTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGATACACTGGGGGCGCTTGCACTGGCCACTGAACCGCCAACAGACAGCCTAATGCGCAGATCACCAGTTGGTCGAAGAGAACCTCTTGTAACAAATATCATGTGGAGAAACTTGCTTGTACAGGCTGTCTATCAAATCACGGTTCTTCTCGTTCTTAACTTCCATGGTGAAAGTATTCTACCCAAACAAGAAACCAGAGCTGATTCCTTTCAAGTGAAGAATACTTTAATATTCAACGCGTTCGTCCTGTGCCAAATATTCAATGAATTCAATGCACGGAAACCCGAGGAAATGAATGTTTTTCGTGGAGTGACGAAGAACAAACTTTTCATGGGTATTGTTGGAGCGACCTTTATACTTCAGATAATCATCATCCAGTTCCTTGGAAAGTTCACCTCAACAGTGAGGCTTGATTGGAAGCTTTGGGTTACTTCTCTTGGTATTGGAATTGTCAGCTGGCCCCTTGCTATAGTTGGAAAATTCATTCCAGTTCCCAAAACACCATTGGCTCGTTACTTCATGACGCCACTCAGGAGGTTTAAAAGGTCTAGGTCTCGTGCTACACAATAG 3453 0.426 MTMNGHSHHTVHIANSTNPNDEDDDDNAFSRSSSSAADDNNNHREDDDEELVDPDDPFDITHTKNVSHDTLRRWRQAALVLNASRRFRYTLDLKKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAVSPPTPVGDYDIGLEQLVSMSKDQNISALQQYGGIRGLSNLIKSNPDKGISGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLTLGIKTEGLAEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNSEKQNIQLEVIRGGRTIKMSIFDVVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKTPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLSVAVLVLAVLLGRYFSGHTRDIEGNVEFVAGETSVDNAVDDVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMQKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGSTKVNPPDDSSKLHPKALSLINEGIAQNTSGNVFVPKDGGEVEVSGSPTEKAILSWAVKLGMNFDVIRSNSKVLHVFPFNSEKKRGGVALKLGDSKVHIHWKGAAEIVLGACTHYLDSDGQLQSIEEEQEFFKKSIDDMAARSLRCVVIAYRSYELRKVPSSEQELDQWSLPEDELVLLAIVGIKDPCRPSVKDAVKLCSDAGVKVRMVTGDNLQTAKAIALECGILASNEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEVFECPKPVVNFKFSVINVPSVLDVTIITFDLTFGIQMQLVVISDDVLSADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDSLMRRSPVGRREPLVTNIMWRNLLVQAVYQITVLLVLNFHGESILPKQETRADSFQVKNTLIFNAFVLCQIFNEFNARKPEEMNVFRGVTKNKLFMGIVGATFILQIIIIQFLGKFTSTVRLDWKLWVTSLGIGIVSWPLAIVGKFIPVPKTPLARYFMTPLRRFKRSRSRATQ 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00162 1150 SUPERFAMILY Calcium ATPase, transduction domain A 285 380 IPR008250 -
Spst8g00162 1150 Gene3D - 188 383 - -
Spst8g00162 1150 SUPERFAMILY HAD-like 495 826 IPR036412 -
Spst8g00162 1150 Gene3D - 66 120 - -
Spst8g00162 1150 Pfam Cation transporter/ATPase, N-terminus 166 232 IPR004014 -
Spst8g00162 1150 PRINTS Sodium/potassium-transporting ATPase signature 250 270 - -
Spst8g00162 1150 PRINTS Sodium/potassium-transporting ATPase signature 626 644 - -
Spst8g00162 1150 PRINTS Sodium/potassium-transporting ATPase signature 500 521 - -
Spst8g00162 1150 SUPERFAMILY Calcium ATPase, transmembrane domain M 165 1125 IPR023298 -
Spst8g00162 1150 Pfam haloacid dehalogenase-like hydrolase 504 826 - -
Spst8g00162 1150 SFLD p-type atpase 489 826 IPR044492 -
Spst8g00162 1150 SUPERFAMILY HAD-like 874 924 IPR036412 -
Spst8g00162 1150 Gene3D - 215 503 - -
Spst8g00162 1150 MobiDBLite consensus disorder prediction 1 63 - -
Spst8g00162 1150 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Spst8g00162 1150 PRINTS P-type cation-transporting ATPase superfamily signature 729 739 - -
Spst8g00162 1150 PRINTS P-type cation-transporting ATPase superfamily signature 707 718 - -
Spst8g00162 1150 PRINTS P-type cation-transporting ATPase superfamily signature 507 521 - -
Spst8g00162 1150 PRINTS P-type cation-transporting ATPase superfamily signature 814 833 - -
Spst8g00162 1150 PANTHER CATION TRANSPORTING ATPASE 107 1125 - -
Spst8g00162 1150 ProSitePatterns E1-E2 ATPases phosphorylation site. 509 515 IPR018303 -
Spst8g00162 1150 Pfam Ca2+-ATPase N terminal autoinhibitory domain 55 98 IPR024750 GO:0005516
Spst8g00162 1150 FunFam Calcium-transporting ATPase 879 1127 - -
Spst8g00162 1150 FunFam Calcium-transporting ATPase 66 122 - -
Spst8g00162 1150 MobiDBLite consensus disorder prediction 1 17 - -
Spst8g00162 1150 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 513 719 IPR023299 GO:0000166
Spst8g00162 1150 NCBIfam HAD-IC family P-type ATPase 446 537 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst8g00162 1150 Gene3D - 504 825 IPR023214 -
Spst8g00162 1150 Pfam Cation transporting ATPase, C-terminus 947 1122 IPR006068 -
Spst8g00162 1150 CDD P-type_ATPase_Ca_PMCA-like 189 995 - -
Spst8g00162 1150 Gene3D - 517 714 IPR023299 GO:0000166
Spst8g00162 1150 Gene3D - 837 1127 - -
Spst8g00162 1150 SMART Cation_ATPase_N_a_2 163 237 IPR004014 -
Spst8g00162 1150 FunFam Calcium-transporting ATPase 263 383 - -
Spst8g00162 1150 NCBIfam calcium-translocating P-type ATPase, PMCA-type 154 826 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Spst8g00162 1150 FunFam Calcium-transporting ATPase 215 272 - -
Spst8g00162 1150 Pfam E1-E2 ATPase 284 485 - -
Spst8g00162 1150 SFLD Haloacid Dehalogenase 489 826 - -
Spst8g00162 1150 FunFam Calcium-transporting ATPase 9 plasma membrane-type 361 531 - -
Spst8g00162 1150 FunFam Calcium-transporting ATPase 517 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00162 Spst-Chr8 1334512 1348713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00162 31 1146 Primary Pumps ATPases AT3G21180 72.898 0.0 1638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00162 K01537 - gmx:100777845 1879.76