Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00159 ATGGAAAACAAGGAGAATCTTGAAGCAGCCAGAAAGTGCTTGACAACTAGTTTGGAAACATCAAGCGCCATAGCCGCTGCACTAGATGAATCTGGGTCAAGATTGGAGCTACTTAACCAGAGATATCTGTCCTTGGAAGCTTCCCTTAGACCCATCTCAATGCAAAAGTGCTCATTTGTCAACATTGAGGACAGTATAGACAGTGTTCTATGTTCTGCTGTTGCACTTCTTAAGGTTCTTGACTGTGTTCATCAGCTGGAGCATTCTCTCTTAACTACAGATCCAACTTCTGATCTAAACACATATGTCTCAGATACAAAGAAGCTTGAGGAAGCACTGAGGCTTCTCACTGATAATTGCAGGTTAGCAGTTAGTTGGTTAAGGGACGTTTACGAGTTCTTACAAGACAAAGCAATCACCAATGAGCTTTACCTGTTGAATGTGAAGAAATCTTTGAGAATATTGCAAGAACTGCAGGTCAAGGAGGAAGGTGCTCGTCTTGATGGAGGCCTTCTTTGTACAGCTTTCGACAAACTAGAGATCGAGTTCCACAGGCTTCTGACAGCAAACTCCGTGCCTTTTCCTTTGGTTTCATTGACATCACCACACACTGGGCATGAAGCCAGTATTGCCAAACATAATTTGCCACTGACAAGTTCTTTAACAGGGAAGTTGCATTCCATCATAGAGAGATTAAATGCTAATGGCAGGCTAGACAAGTGTCACTCCATATATGTTGAAGTTCGAGGTATTAATGTTCGTCGAAGTTTGAAGACTTTAGATTTGAGTTATCTCGATATTCCAACTACTAAACTTGAGGCTGTCCACTGTATAGAGAGTTACATAGACCAATGGGGCTTCCATTTGGAGTTGGTTGTGAAGCAACTGCTCGGTATTGAGTGCAGGCTTTTCACTTTGGTCTTTGAGAAAATTGGTCCAGAAGCATGCATGGAGTGCTTTGCAAAGATTGCCATCGAATCAGGAATTCTTTCTTTTATTCGATTTGGAAGGATTGTTACCGAGAGGAAAAATGACCCCTTCAAATTGTTGAACCTGCTGTCCATATTCAGGGTTTTAAATGATCTGAGGCTAAAATTCAACCAACTTTTCAGTGCGAAAGCTTGTAAAGAAATTAGAACTGTGACAGAGGATCTTATAAAAAAGGTTGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAGCACAAGTGAAGTTGCAAAGGCCAACTTCTCCTCCCCCTGATGGCAGCGTTCCCAGGCTGGTAAGCTTTGTGACTGATTATTGTAATCAGCTGCTTGGGGATGCCTACAGGCCACATTTGACGCTGGTTTTGGAAATACATCTTAGTTGGAGAAAGGAAGCGTACGAAGAGGGCATTGTTTTATGCCAAATATATAACACAATTAAGGAAGTTGCAGTTAATTTGGATGCTTGGTCGAAGGCCTATGAAGATATCACATTGTCCTACCTTTTTATGATGAATAATCACTGTCATTTCTGCAATTTGAGGGCTACTGTGCTTGGAAATATGATGGGAGATTCTTGGTTAAGAGCACACGAACAATATAGGGACTATTATGCAGCACTTTATTTGAGGAACAGCTGGGGAAAGCTTCTATCTATTCTTGTAGTTCAAAAGAACATATTTCCCCCCTCCAGTGCAAGTGTGACATGCCAAGACTTGGCAAAGAGACTAAATGCTTTCAATCTAGCTTTTGAGGAAAGGTACAAGAAGCAATCTAATTGGGTAATCTCCGATGAGATCTTGAGGGAAAATGTATGCAAGCATTTGGCCGAAGGTATTATACCAATCTATAGGGCCTACGTCAAGAACTATTGTTTGTCAACTGAAAATGATGCTAAGGTTAACAAACTTATGAAATATTCAGCGCAGAGTTTAGAGAACAAGATTAGATCTCTGTTTCAGACCAAGCAGAAGAAGGGTAGTAGCATTAAACAGGCAGACTTGATTAGTAAAATAAAAGATCTCAGTCATCAATTTCGCTTAACTCTAGCTCTTCTATGA 2028 0.4088 MENKENLEAARKCLTTSLETSSAIAAALDESGSRLELLNQRYLSLEASLRPISMQKCSFVNIEDSIDSVLCSAVALLKVLDCVHQLEHSLLTTDPTSDLNTYVSDTKKLEEALRLLTDNCRLAVSWLRDVYEFLQDKAITNELYLLNVKKSLRILQELQVKEEGARLDGGLLCTAFDKLEIEFHRLLTANSVPFPLVSLTSPHTGHEASIAKHNLPLTSSLTGKLHSIIERLNANGRLDKCHSIYVEVRGINVRRSLKTLDLSYLDIPTTKLEAVHCIESYIDQWGFHLELVVKQLLGIECRLFTLVFEKIGPEACMECFAKIAIESGILSFIRFGRIVTERKNDPFKLLNLLSIFRVLNDLRLKFNQLFSAKACKEIRTVTEDLIKKVVNGASEIFWQLPAQVKLQRPTSPPPDGSVPRLVSFVTDYCNQLLGDAYRPHLTLVLEIHLSWRKEAYEEGIVLCQIYNTIKEVAVNLDAWSKAYEDITLSYLFMMNNHCHFCNLRATVLGNMMGDSWLRAHEQYRDYYAALYLRNSWGKLLSILVVQKNIFPPSSASVTCQDLAKRLNAFNLAFEERYKKQSNWVISDEILRENVCKHLAEGIIPIYRAYVKNYCLSTENDAKVNKLMKYSAQSLENKIRSLFQTKQKKGSSIKQADLISKIKDLSHQFRLTLALL 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00159 675 Pfam Exo70 exocyst complex subunit 285 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst8g00159 675 Gene3D Exocyst complex component Exo70 132 650 - -
Spst8g00159 675 SUPERFAMILY Cullin repeat-like 76 642 IPR016159 -
Spst8g00159 675 PANTHER EXOCYST COMPLEX PROTEIN EXO70 106 642 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00159 Spst-Chr8 1309194 1311221 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00159 5 675 EXO70 exocyst subunit family AT4G31540 47.724 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00159 K07195 - gmx:121175138 1136.71