Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00147 ATGGATGCACTTCCATCAGGAATTATGAAACGCCTTCAGGAAACCGTGAAGCTAATGATGGAAGCAGGGTTTGAGGAGGAATGCAGCGACGTTTACAGCAAATGGCGAAGGGAGTTTGTAGAACAGTGTCATTGGGCACTTGGGTTGCAATTTCAAGAGCCCAACATGGAAGACGTTGAGAAATGGATAAAAATGTGCGAGGTAGCTGGGAAGATACTGTTTCCCATTGAAAGGAGACTCTGCGATTACCTCTTCTCGGGGTTCCCTCTCGCTGCTGATGCCTACCTCCCGAAGGTTTGCAAGCAGTTGACGATTGGTCTACTGAGTTTTGTGGATACCGCCATAACAGCTCGGAGTTATTTGCCAAATTTTTTGTTCAACATCGTCCCAAAAATGTACGAGTCATTGACCGCGATGTCAAAGGAGTGCATCTCACTGAATTTGTTTGAGCTGTCGATTCTAGATTATTTTCGAGACGTTTTGGAAAGATTGGATATTTTAAACAACTTTGCGAATCTTTTTCACCGTAATAATGCGCGGGCACATGTTGCCGATGGAGGGCTTCATCTGATTACCAAGCAAGTAATGAACTACATCCTTATGATTTGGGAAGACAAAATATGGAGGGCTCCCCAATCTTACCGCATCGTCTCTGGTAGAGAGAAGTCTTCACTTTGGATGCTGACAGCGCGGACGATTGGGTTTTTGGAGAGCGAGTTGGAAGCCAAGTCTAGAGACTACTACGCGGACCCTGCATTGGGGTACCTTTTTATGATAAAAAATCTCAGCTACATAGGAGAAAAGGCCAAATATTTGAAATTAAATGTTGACAGAATCATATTGGACGATGATTGGTTCCAACAAAACACGGCAAAGGTAGAAGAATACTTCAGCCTGTATCTAGAAAGCTCGTGGAATAAGATGCTGGACTTTCTGAAGCTTGAGACAAATGAGTCCGTGGCACCTGGTGTGGTAGAGAAGTTAATGAAAGATAGGCTCCATTTTTTCAACCTACATTTTGATGAGACATGCAACGTTCAATCTACATGGATTGTCTCTGATAAGACACTAAGGGAACGAATGATAAAATCCATTCACACCATCTTGTTGCCAGAATATGGAAGATTTTATGACAGATTTCTACATGTTTTTGGTGATCGTGCTTGTAACTATGTTCTGTTCCGAGCTGATGAGATTGAAAATCATAAAGACAAGAACCAGATTCCAACGAAGCAAGTACCGGATGTTGACGTCAACTTGGTGATGGATGCACTTCCATCAGGAATTATGAAACGCCTTCAGGAAACCGTGAAGCTAATGATGGAAGCAGGGTTTGAGGAAGAATGCAGCGACATTTACTGCAAATGGCGAAGGGAGTTTGTAGAACAGTGTCATTGGGCACTTGGGTTGCAATTTCAAGAGCCCAACATGGAAGACGTTGAGAAGTGGATAAAGACGTGCGAGGTAGCTGGGAAGATACTGTTTCCCATTGAAAGGAGACTCTGCGATTACCTCTTCTCGGGGTTCCCTCTCGCTGCTGATGCCTCCTCCATGAAGGTTTGCAAGGAGTTGACGATTTGCCTACTGAGTTTTGCTGATACCGCCATAGCAGCTTGGTTGCCGAATCTTTTGCTCGAAGTCGTCCCTAAAATGTACGCGTCATTGAGGACGCTGAAATGGGATTTGATGTCGCTGAATTTGTTAGGCAACAGTGTTTTGCTCCTAGATTGTTTTGAAGACGTTACGGAAAGATTGGTTATTTTAAAGAATGTAACAAATTTTTTTCACCGTAATAATGAGCAGGCACATGTTGCCTATGGAGGGCTTCATCTGGTTACCAAGCAATTAATGAACTACATTTGTCAAGGTATGATAAAGTCCGCTTCCGGAGCTTCCGGCATCGTTCCTCATAGAGAGGTAAAGTCTTCATATTGGGTGCTGCCAGCAAGGATGATTGAGTTGTTTGAAAGCGCCTTGGAAGCCAAGTCTAGAGACTACTACACTGACCCTGCAATGGGCTATGTCTTTATGATGGATAATCTCAGCTACATAGGAGAAAAGGCGAAATATGTGAAACCATATAAGGACGGAATCATATTCGACGATGGTTGGTTCCAACAAAACACAGCAAAAGTGGAAGAATACTTTAACCTGTATCTTAAAAGCTCGTGGAAAAAGATACTGGACTTTCTGAAGCTTGAGACAAATGAGTCGGTGGCACCTGGCGTGGTAGAGAAGCTTGAGACAAAAGATAAGCTCCGTTTGTTCAACCTTCACTTCGAAGAGACATGCAACCTTCAATCTACATGGATTGTCTCTGATAAGAGACTAAGGGAATGGATGATAAAATCCGTTCACAGCATCTTGTTGCCAGAATATGGAAGATTTTATGACAGGTTTCTACGTGATTTTGGTGAGTGTGCTTCTAACTATATTCTGTTTGGAATTGAGGAGATTCAAAATTGTCTCAGTAATTTGTTTCTTCTAGATGAGTAG 2496 0.4283 MDALPSGIMKRLQETVKLMMEAGFEEECSDVYSKWRREFVEQCHWALGLQFQEPNMEDVEKWIKMCEVAGKILFPIERRLCDYLFSGFPLAADAYLPKVCKQLTIGLLSFVDTAITARSYLPNFLFNIVPKMYESLTAMSKECISLNLFELSILDYFRDVLERLDILNNFANLFHRNNARAHVADGGLHLITKQVMNYILMIWEDKIWRAPQSYRIVSGREKSSLWMLTARTIGFLESELEAKSRDYYADPALGYLFMIKNLSYIGEKAKYLKLNVDRIILDDDWFQQNTAKVEEYFSLYLESSWNKMLDFLKLETNESVAPGVVEKLMKDRLHFFNLHFDETCNVQSTWIVSDKTLRERMIKSIHTILLPEYGRFYDRFLHVFGDRACNYVLFRADEIENHKDKNQIPTKQVPDVDVNLVMDALPSGIMKRLQETVKLMMEAGFEEECSDIYCKWRREFVEQCHWALGLQFQEPNMEDVEKWIKTCEVAGKILFPIERRLCDYLFSGFPLAADASSMKVCKELTICLLSFADTAIAAWLPNLLLEVVPKMYASLRTLKWDLMSLNLLGNSVLLLDCFEDVTERLVILKNVTNFFHRNNEQAHVAYGGLHLVTKQLMNYICQGMIKSASGASGIVPHREVKSSYWVLPARMIELFESALEAKSRDYYTDPAMGYVFMMDNLSYIGEKAKYVKPYKDGIIFDDGWFQQNTAKVEEYFNLYLKSSWKKILDFLKLETNESVAPGVVEKLETKDKLRLFNLHFEETCNLQSTWIVSDKRLREWMIKSVHSILLPEYGRFYDRFLRDFGECASNYILFGIEEIQNCLSNLFLLDE 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00147 831 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 399 IPR004140 GO:0000145|GO:0006887
Spst8g00147 831 Pfam Exo70 exocyst complex subunit 482 824 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst8g00147 831 Pfam Exo70 exocyst complex subunit 61 401 IPR046364 GO:0000145|GO:0005546|GO:0006887
Spst8g00147 831 Gene3D Exocyst complex component Exo70 405 830 - -
Spst8g00147 831 Gene3D Exocyst complex component Exo70 1 404 - -
Spst8g00147 831 SUPERFAMILY Cullin repeat-like 3 401 IPR016159 -
Spst8g00147 831 SUPERFAMILY Cullin repeat-like 417 827 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00147 Spst-Chr8 1213711 1218508 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00147 401 827 EXO70 exocyst subunit family AT5G58430 37.225 3.45e-72 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00147 K07195 - var:108336450 670.618