Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00144 ATGGGATACACTTCATTGCTCAGAAGCCCCAAGAAAGAAGAACAAGAGGTACCAGATGCCATCACCTCCTCATTGCCAATTTCTAACCAACCCTACACCTGTGAAGATTTCAATATTTTAGATGAACTCCAAGGGGTCTTCAACTCCAAGGAGGATCAAGAGTTGCTGCATCAAAACTCTTCAAGTGCAGAACTTCACTGGGATTTCATGGAATGGGAGGAATTCGCCCCCATTGGAGAGGAAGGAGAAGATGAAAACGAAGGGAAAGAGAATGTTACAGAGGGCATGAGCCATTACCTTTTTGAGGAGCAGCAGATAAAGAGAGAAAGCATTGTTGGGTTCTGGGAAGTGGATGATGAGAAGATGGTCGCTTTGAACTTGAACTTGAACTATCAAGAGGTTTTGGATGCATGGTCTGACCGAGGGTCTCTCTGGGCTGATGACTGTTCTCTTTCATTCGCCACCAACAATGGCTACTATAATGGAGAAGTGCCAGTGTTGGAAGAAGAGAGAGCAAGGAGGGAAGCAAGTGTTCTTAGATACAAAGAGAAACGTCAGAACAGATTGTTCTCAAAGAAGATAAGATACCAAGTTCGGAAATTAAACGCTGATAAAAGACCAAGAATCAAGGGTCGCTTTGTGAAGAGACACTGA 654 0.4388 MGYTSLLRSPKKEEQEVPDAITSSLPISNQPYTCEDFNILDELQGVFNSKEDQELLHQNSSSAELHWDFMEWEEFAPIGEEGEDENEGKENVTEGMSHYLFEEQQIKRESIVGFWEVDDEKMVALNLNLNYQEVLDAWSDRGSLWADDCSLSFATNNGYYNGEVPVLEEERARREASVLRYKEKRQNRLFSKKIRYQVRKLNADKRPRIKGRFVKRH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00144 217 Pfam CCT motif 174 216 IPR010402 GO:0005515
Spst8g00144 217 MobiDBLite consensus disorder prediction 1 26 - -
Spst8g00144 217 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 45 216 - -
Spst8g00144 217 ProSiteProfiles CCT domain profile. 174 216 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00144 Spst-Chr8 1201612 1202730 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00144 118 216 C2C2-CO-like Transcription Factor Family AT1G73870 47.059 3.92e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst8g00144 CCT 2.1e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00144 - - aprc:113847792 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00144 8 1201612 1202730 Spst8g00144 8 1201612 1202730 ECH