Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00140 ATGGATAAGGTGGTGTGTGTCACCGGCGGCAGCGGCGCCATTGGTTCATGGCTCGTCCACCTCCTTCTGGATCGCGGCTACACCGTTCACGCCACCGTGCAAAATCTCAACGATGAGGCCGAAACGAAGCATCTAGAAGCCCTGGATGGAGCTTCGGCGCGCCTCCGCCTCTTCCAGATGGATCTCCTCCACTACGACTCCATCATCGCCGCCGTGCGCGGCTGCGTTGGCGTCTTCCACCTCGCCTCTCCCTGCACTGTCGACCAAGTCCACGACCCCCAGAAGGAACTTCTGGACCCGGCTATCAAAGGCACCGTGAACGTGCTCACAGCCGCGAAAGAAGCAGAGGTGCGGCGCGTGGTGGTCACGTCCTCCATCTCCGCCATTACTCCGAGCCCCAATTGGCCCGGCGATGTTCCCAAGAGGGAGGACTGCTGGACCGACGTTGAATTTTGCAAGCAAAAGGGGTTGTGGTATCCGTTGTCGAAGACTTTGGCCGAGAAAGCGGTTTGGGATTTTGCGAAAGAGACTGGGTTGGATGTTGTTGTGGTGAATCCTGGCACTGTGATGGGTCCTGTTATTACACCGAGGCTTAATGCAAGCATGGTCATGCTTGTGCGCCTTCTTCAAGGCTGTGATGATACATATGAGAACTTCTTTATGGGATCGGTTCACTTTAAGGATGTAGCATTGGCACATATTTTGGTGTATGAGAACAAATCTGCCGCTGGTAGGCATGTGTGTGTTGAAGCTATCTCTCACTATGGTGATTTTGTGGCCAAAGTTGCTGAACTTTATCCAGAGTACAATGTGCCCAAGATGGAACTAGATACCCAACCGGGATTACTGAGAGTGAAGGATGGATCTAAGAAACTTATGGATTTGGGTTTGCAATTCATTCCAATTGAGAAGATTATAAAGGACGCCGTAGAGGATTTGAAGAGCAAAGGGTTCCTTTCATAA 963 0.5202 MDKVVCVTGGSGAIGSWLVHLLLDRGYTVHATVQNLNDEAETKHLEALDGASARLRLFQMDLLHYDSIIAAVRGCVGVFHLASPCTVDQVHDPQKELLDPAIKGTVNVLTAAKEAEVRRVVVTSSISAITPSPNWPGDVPKREDCWTDVEFCKQKGLWYPLSKTLAEKAVWDFAKETGLDVVVVNPGTVMGPVITPRLNASMVMLVRLLQGCDDTYENFFMGSVHFKDVALAHILVYENKSAAGRHVCVEAISHYGDFVAKVAELYPEYNVPKMELDTQPGLLRVKDGSKKLMDLGLQFIPIEKIIKDAVEDLKSKGFLS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00140 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 310 - -
Spst8g00140 320 CDD FR_SDR_e 5 297 - -
Spst8g00140 320 Gene3D - 1 320 - -
Spst8g00140 320 FunFam Cinnamoyl-CoA reductase 1 1 320 - -
Spst8g00140 320 Pfam NAD dependent epimerase/dehydratase family 5 239 IPR001509 -
Spst8g00140 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00140 Spst-Chr8 1172937 1185146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00140 3 320 Monolignol Biosynthesis Gene Families AT5G58490 76.415 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00140 - - gmx:100803241 589.726