Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00134 ATGGCCGCAGCCTTAGAGTGCTGGTCCAGCCGCGCCACCACTGCCGCCGACGATGACACGGTGGAGCAGGTCCTCATGCGCTCCCACCACAGATCCGAAGGTCCTGCTTCCACCCCCAAAGACCCCTCCTCCATGCCCAACGTCCACAAGAAGTTCCAGAAGCTCACCCGCAACGTCTCCGAAGCCATCGCCTCCTTCAGAAACTCCCTCAACCTCGATTCCCCTCCTTCCTCCAAAGCCGATGCCTCTTCCCGGAAACTCGTCTGGGGAAGTGTGGTTCGCAACCTCACGCAGCTCTACCCCGGAAGCCAGCTCCCCGAGAAACTGATGTCCAACATACGCAAGCATTATGATTCCTTGCCCCTCAGTTATGCACAGGCTGAGTTTGATATGAAGGATGTGTTTCTTCACATAAAGTTGATGGAGCAAGCTTCGGAGAGTGACCAGCCTGCGATTTTGATTCAAGAGGAGTGTGATGATGATGTTCATGGTTCTGCTCTGAGACTCACGTTTGCTTGCAACTCTCCGATTTCGTGGCCTGCGATGTCGGGGGCGTTGGATACTTCCTCCATTTGCTGCAAGAGGATGCAAATCTTCGAGAAGAAGGGTTTCACCTTGGGGGTTGTGCTTCTTGTAGTTCAGTCTGGGCATGATAAGTTGGTGAGGACTAGGGTTGAAAATGCTTTGAAGTTTGCTATGAAGAAGCCTAAAACTGGTGCTGTGAAGCTTCCCTTCGGGCTCTGTGGGTGCCAAGAGGAGAATTCTAAAGGGAGAGATCTTTTGGAGATTGAAGAAGATAACGGTGATGGTTACCGGGGAAAGGAGTTTGAGAATTCAAGTCAAAGGATTCAGCTGCAGGTGCCTTTGCCTTCTTCATCTTTTGTTGTGTCAGTGGATGAATGGCAGACCATAAAGTCAGGTGGGGATGAGATTGAGAAATGGTTGTTAAACTCAGATAGTGTTGAGTTTGTTGAGCAGATTGGCCCGAATTCGTATAAAGGAGTGTATATGGGGAAGAGAGTTGGGATTGAGAAGCTGAAGGGGTGTGATAAAGGGAACTCTTACGAGTTTGAGCTCCACAAGGATCTGTTGGAACTCATGACTTGTGGTCATAGGAACATTTTGCAGTTCTGCGGTATTTGTGTGGATGATAATCATGGGCTGTGTGTGGTGACCAAGTTCATGGAAGGTGGATCTGTTCATGACCTGATGTGGAAGAACAAGAAGCTGCAGAATAAGGATATTGTGAGGATTGCAGTTGATGTGGCAGAAGGGATAAAGTTTATGAATGACCATGGTGTTGCCTATAGAGACCTTAATACACAGAGGATTCTGCTGGATAAGCATGGGAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGTGTTGGAGAAGCTATGGAGTATGAAACTGATGGTTATAGGTGGCTAGCTCCTGAGATAATAGCAGGGGACCCAGAGAATGTGACAGAGACATGGATGAGTAATGTGTATAGTTTTGGGATGGTAATTTGGGAGATGGTAACTGGTGAGGCAGCATATTCTTCATTTTCACCAGTGCAAGCAGCAGTGGGCATTGCTGCATGTGGCCTTAGACCTGAAATCCCAAAAGACTGTCAACAAACTCTAAAATGCATTATGACAAAGTGCTGGAACAACACCCCTTCCAAACGCCCTCCCTTCTCTGAAATCTTAGCCTTATTGCTGCGACCAAACAACAACAACAGATAA 1740 0.481 MAAALECWSSRATTAADDDTVEQVLMRSHHRSEGPASTPKDPSSMPNVHKKFQKLTRNVSEAIASFRNSLNLDSPPSSKADASSRKLVWGSVVRNLTQLYPGSQLPEKLMSNIRKHYDSLPLSYAQAEFDMKDVFLHIKLMEQASESDQPAILIQEECDDDVHGSALRLTFACNSPISWPAMSGALDTSSICCKRMQIFEKKGFTLGVVLLVVQSGHDKLVRTRVENALKFAMKKPKTGAVKLPFGLCGCQEENSKGRDLLEIEEDNGDGYRGKEFENSSQRIQLQVPLPSSSFVVSVDEWQTIKSGGDEIEKWLLNSDSVEFVEQIGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELHKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKFMEGGSVHDLMWKNKKLQNKDIVRIAVDVAEGIKFMNDHGVAYRDLNTQRILLDKHGNACLGDMGIVTACKSVGEAMEYETDGYRWLAPEIIAGDPENVTETWMSNVYSFGMVIWEMVTGEAAYSSFSPVQAAVGIAACGLRPEIPKDCQQTLKCIMTKCWNNTPSKRPPFSEILALLLRPNNNNR 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00134 579 PRINTS Tyrosine kinase catalytic domain signature 542 564 IPR001245 GO:0004672|GO:0006468
Spst8g00134 579 PRINTS Tyrosine kinase catalytic domain signature 392 405 IPR001245 GO:0004672|GO:0006468
Spst8g00134 579 PRINTS Tyrosine kinase catalytic domain signature 498 520 IPR001245 GO:0004672|GO:0006468
Spst8g00134 579 PRINTS Tyrosine kinase catalytic domain signature 428 446 IPR001245 GO:0004672|GO:0006468
Spst8g00134 579 ProSiteProfiles Protein kinase domain profile. 321 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00134 579 MobiDBLite consensus disorder prediction 25 47 - -
Spst8g00134 579 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 86 571 - -
Spst8g00134 579 Gene3D Transferase(Phosphotransferase) domain 1 314 575 - -
Spst8g00134 579 Pfam Protein tyrosine and serine/threonine kinase 356 570 IPR001245 GO:0004672|GO:0006468
Spst8g00134 579 SUPERFAMILY Protein kinase-like (PK-like) 301 571 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00134 Spst-Chr8 1108193 1112728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00134 304 571 MAP Kinase Kinase Kinase AT2G17700 33.455 3.16e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Spst8g00134 PK_Tyr_Ser-Thr 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00134 - - pvu:PHAVU_008G258400g 1104.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00134 8 1108193 1112728 Spst8g00134 8 1108193 1112728 ECH
Spst6g00129 6 1494348 1498144 Spst8g00134 8 1108193 1112728 PCT