Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00131 ATGGCAGCATTTGCTCCGATGAAGTTATTTCTGGCGGTGCTGACTCTGCTTTTGGTGTTGAGCCAGAAACAGAGTTTCTGTTCAAGTCTCGAGAGCGAAGGTTTGGCGTTGCTGGCGTTGAAGGAGAGGTTGGTGTCAGACCCGCAGGGAGCTTTATCAAGCTGGAGTGGCGAAAATGGAGACGATATAGATCCATGCTCGTGGTTTGGTGTCGAGTGTTCTCACGGTAATGTTGTGACTGTGAATTTGAAAGACCTTTGTCTTGAAGGAACTCTAGCACCAGAAGTTGGAAATCTAGCTCACATAAAATCAATCATTTTGCGTAATAATTCTTTCTTTGGAGAAGTTCCCGAGGATATTCTACACCTACAAGAGCTGGAAGTCCTTGACTTGGGACTTAACAACTTTAGTGGACCACTGCCATTTGACCATGTCAATATGCCATCTCTGACAACTCTTTTATTGGACAACAATTACTATCTGACCAATTTAACTCCAGAGCTGTATAAGCTCACGATGAATGCTGAATTTCATGCTAATGAAGAACAACTAACTGGTGCCACCACGACTAGAGAAGCATATGTTGGCAGATGTAGTTTATGGCGCATTGGCCAACATGGGGATAAAGCGTATAGGAGGCAACTTCTCAAAGTAGCAACTGCTGCTAGTATACCCAGAATCCACGGGGAAGTTAACCGAGGGATACTTAAACAACTAGCATCTCATTTCCCTTTTTCATTACCACCAAATTTTGAGTCTTTCTCATCATCACCATCACCATCGCCGTTTTCACCATCCGAAAGTCCCTCACCTTCACCATCATTATCTCCCTCAGATATTTTTTTCACTCCTTCACCCTCTCCTTCGCCTGAAGTGTTACTAACTCCAGACACATCACCCCCAGCAAACACTCCTCTCGCTGTGTCTACACCACCAGAGTTTAATTGGGTCTCAGCACCTAGCCCTTCTCCATTTTCTACCCAAGGGAAGACATACAGTTCCAATCAAATACATCATTCGGCGATAATCTGGTCTTCAGTTGGGGGCTTCTCTTTATTGATTTTGGTGTCAGCCATTATTTTTGCTTGCCTCCGAAGTAGGAAGGTTGTGAGTGTTAAACCTTGGTCCACAGGGTTGAGTGGCCAGCTGCAGAAAGCCTTTGTAAAAGGTGTGCCAAGTCTCAAACGAGGAGAGATTGAAGCAGCTTGTGAATATTTCAGCAACATTATCGGTTCTCTTCCTGATGGAACTGTGTACAAGGGGACTCTCTCCAGTGGAGTCGAAATAGCTGTAGCATCCTCTGCAGTGAACACAGCTCAAAAATGGTCAAAAAGTATGGAAACTCAATTTCGAAACAAGATAGCGACATTATCTAGAGTGAATCACAAGAATTTTGTGAATTTAATTGGGTATTGTGAAGAGAACAAGCCATTCGCAAGAATGATGGTGTTTGAGTACGCTCCAAATGGAACACTCTTTGAGCATATACACATTAGAGAAGCAGAAGAACTAAATTGGAGAATGAGAATGAGGATAGCTATGGGAATAGCCTACAGCCTAGAGTATATGCATGACCTAAAACCCTCCATTGCCCATAGAAACCTGCAATCTTCATTTATATACCTTACTGAAGATTATGCTGCTAAAATATCAGATCTTAGTTTATGGAATGACATGTGTGCTGCAAAGAATGGGTCTGCAACCGCACAACTGTTGGAAACATCATCAGCAGATGCCAAGGACAATGTTTACAGCTTCGGAATAATATTATTTGAGTTGATTACGGGGAAAATCCCCTTTGCTGGGAACAATGAACTTCTGGCAGATTGGGCGGCAGAATATTTAAGGTGGGGGAAATCCTTAAGAGATGTTGTGGATCCGAGCCTGAACTCTTTGCAGGAAGAAGAGATTGAAGAATGGTCGGAAGTGATAAGAAACTGTGTACATCCAGATCGAGAGAAAAGGCCAACGATGAAAGAAGTTACATCTAGACTCAAGGAAATAACAGCTATGGGGCCTGATGGAGCAAATCCAAAAGCATCCCCACTTTGGTGGGCAGAAATGGCAATTACGTCCACTGATTCAAGTTGA 2091 0.4323 MAAFAPMKLFLAVLTLLLVLSQKQSFCSSLESEGLALLALKERLVSDPQGALSSWSGENGDDIDPCSWFGVECSHGNVVTVNLKDLCLEGTLAPEVGNLAHIKSIILRNNSFFGEVPEDILHLQELEVLDLGLNNFSGPLPFDHVNMPSLTTLLLDNNYYLTNLTPELYKLTMNAEFHANEEQLTGATTTREAYVGRCSLWRIGQHGDKAYRRQLLKVATAASIPRIHGEVNRGILKQLASHFPFSLPPNFESFSSSPSPSPFSPSESPSPSPSLSPSDIFFTPSPSPSPEVLLTPDTSPPANTPLAVSTPPEFNWVSAPSPSPFSTQGKTYSSNQIHHSAIIWSSVGGFSLLILVSAIIFACLRSRKVVSVKPWSTGLSGQLQKAFVKGVPSLKRGEIEAACEYFSNIIGSLPDGTVYKGTLSSGVEIAVASSAVNTAQKWSKSMETQFRNKIATLSRVNHKNFVNLIGYCEENKPFARMMVFEYAPNGTLFEHIHIREAEELNWRMRMRIAMGIAYSLEYMHDLKPSIAHRNLQSSFIYLTEDYAAKISDLSLWNDMCAAKNGSATAQLLETSSADAKDNVYSFGIILFELITGKIPFAGNNELLADWAAEYLRWGKSLRDVVDPSLNSLQEEEIEEWSEVIRNCVHPDREKRPTMKEVTSRLKEITAMGPDGANPKASPLWWAEMAITSTDSS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00131 696 MobiDBLite consensus disorder prediction 256 281 - -
Spst8g00131 696 Gene3D Phosphorylase Kinase; domain 1 364 486 - -
Spst8g00131 696 Pfam Protein tyrosine and serine/threonine kinase 409 665 IPR001245 GO:0004672|GO:0006468
Spst8g00131 696 SUPERFAMILY Protein kinase-like (PK-like) 399 665 IPR011009 -
Spst8g00131 696 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Spst8g00131 696 Gene3D Ribonuclease Inhibitor 29 205 IPR032675 -
Spst8g00131 696 Gene3D Transferase(Phosphotransferase) domain 1 487 675 - -
Spst8g00131 696 PANTHER PROTEIN MALE DISCOVERER 2 12 693 - -
Spst8g00131 696 FunFam Inactive receptor-like serine/threonine-protein kinase 378 486 - -
Spst8g00131 696 ProSiteProfiles Protein kinase domain profile. 404 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00131 696 FunFam Nuclear pore complex protein NUP107 30 190 - -
Spst8g00131 696 SUPERFAMILY L domain-like 30 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00131 Spst-Chr8 1079247 1084292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00131 384 668 Receptor kinase-like Gene Family AT4G31110 33.876 7.17e-41 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Spst8g00131 PK_Tyr_Ser-Thr 2.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00131 - - gmx:100779427 1055.43