Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00130 ATGCGTGGCCTGAAGCTCGTTGAACGCTTCAAGAGCACCCAAGTTCATGCCCTGAATTCAGAAGCCACTGGCAGAAAAAACAAGGCCACAGGAGGAGCCATCACAATCAGATCACTGGTGTCGAAATCCAAATCCAAAACCACGACAACCTCAGCAGTTGCAAACCTGTTTGTTCCTCTTCAGCTCCCTTCTTCTGACTCTCTTGAGCCTTCAATAGAACCTTATCTTAAACCCATCAACCTCGTGGAGGCCTTGGCAGAACTTTACCACAGGCAAGAATGTTGCCTTCAATCTGAAAAAGCATCACTTTGTGTGGAGCAGTTCACTCTGTTGCGCGGCCTCGGAGACCAGAAGCTTCTTAGGAGATGTATCAGAACAGCACGGCAAAACGCTGCGGACGTTCTTTCCAAGGTTGTGCTTTCGGCATGGTTGAGGTTTGAGAGGAGGGAGGACGAGCTTGAGGGTGTTTCTTCAATGGATTGTGGTGGTTGTGTTATTGAATGTCCAAAGGAGAACTTGGTGCATGGGTTTAGTCCTTTTTCAATCAATGACAGGTGCCAGTGTCCCCAAGTGACGAAACAGGAAACTAGCACTGAAGAAAATGTGTGTTTGTGTTTGCCAGATGAGGAAAAAGATGTTTCTTTTTGCATCGGGGGTGAGGAAATTGATTGCGTTAGGTGGAGAATTGCAGCCCTATCCGACCCTTTTAAGACTATGCTTTATGGTGGCTTTGCTGAGTCCAAAATGAGGAAGATTGTTTTCAGCCAAAATGGGATATGCTCCAAGGGTATGAGGGCTGTGGAGTTGTACAGCAGGGCTAAGAGGTTAGACTTTTTCTGTCCTATGACTGTTTTGGAGCTGCTTTCCTTTGCGAATAGGTTCTGTTGTGAGGAGATGAAAGCTGCTTGTGATGCTCATTTGGCTTCAATTGTTGGAAGTGTAGACGATGCATTGATTTTTATCGACCATGGATTGGAAGAGAGAGCACCCCTTCTTGTGGCTTCCTGCTTGCAAGTGTTGCTCAGGGAGCTACCAAATTCTTTATGTAATTCTAACTTGATGAATGTATTCTGTAGTTCTCAGGGAAGGAAAAGGTTGGCCATAGTGGGGTATGATTCTTTCTTACTGTACTATTTCCTGAGCCAGGTGGCTATGGAGGAAAGCATGGTGTCAAAAACTGCAGTGATGTTACTAGAAAGGCTGGGTGAGTGTGCTACTGAAAGGTGGCAGAAGGCCCTTGCCTTCCACCAATTGGGGTGTGTGCTGCTTGAGAGGAAAGACTATAAAGAAGCTCAGCATAGTTTTGAGGCAGCAGCTGAAGCAGGTCATTTGTATTCTGTGGCTGGTGTAGCCAGAAGCAAGTACAAGCAGGGTCAACCATATTCAGCCTATAAGTTAATTAGTTCTCTCATGTTTGAGCACAAGCCTGCTGGGTGGATGTATCAGGAGCGTGCTCTTTACAATATGGGAAGGGAGAAAATGTTTGATTTGGATGTTGCAACTGAATTGGATCCCTCCCTTTCATTTCCGTATAAATATAGAGCCCTGAGAAAGGTGGAGGAGAAGCAGATAAGGGCTGGAATTTTAGAGCTTGATAAAATCATTGGATTTAAGCTCTCTCCTGATTGCTTAGAATTGCGGGCTAGGATGTTTATTGCACTTAAGGATTATGACAGTTCCATAAGAGATATCAGGGCATTGTTAACTTTGGAACCAAATTATATAACTTCAAATGAAAAGATCACAGGAAAATACCTGGTTCATCTCCTTAGCCATGTGGTGCAGGAGAAGAGTCAGGCTGAATGCTGGATTCAATTATATGAACAATGGTCTTCTGTAGATGATGTTGGTTCTTTGGCTATTATACATCAGATGCTAGAGAATGAGCCTGGAAAGAGTTTGCTGGAGTTTCGTCAGTCTCTACTCCTTTTGAGGTTAAACTGTCAAAAGGCTGCAATGCGCAGTTTGAGGATGGCCAGAAACCATTCTAGCTCAATGCAAGAAAGGTTAATTTATGAAGGATGGATTCTATATGATACTGGCTATAGGGATGAAGCACTGGCTAGGGCTGATAGGTCAATTACAATACAGAGATCATTTGAAGCCTATTTCCTAAAAGCATATGTATTAGCAGATACGAGTCTGGATCACGAATCTGCTTCTTACGTTATCGAACTTCTGGAAGAAGCACTTAAATGTCCTTCAGATGGTCTTCGCAAAGGACAAGCACTAAATAACTTAGGGAGTATTTATGTAGATTGTGGTAAGCTCGATCTTGCGAAAGCATGCTATGAGAACGCCCTTGCAATTAGGCACACTAGAGCTCATCAAGGTCTAGCACGAGTATATCATCAGAAAAATCAAAGAAAAGCTGCATTTGACGAGATGACCAAGCTAATTGAGAAGGCAGAGAGCAATGCCTCAGCATATGAGAAACGATCAGAATACTGTGACCGTGAGAGGGCAAAGGTTGATCTGGATGTAGCAACCCAACTGGATCCATTAAGGACATATCCATATAGATACAGGGCAGCAGTGATGATGGATGAGCAAAAGGAGTCTGAAGCTGTAGAAGAGCTCACCAAAGCCATAAATTTCAAACCTGACTTGCAAATGCTTCATCTCCGAGCAGCATTTTATGAGGCAGTAGGGGACCTCTCTTCGGCTCTTCAAGATTGTCAGGCAGCTCTATGCTTAGACCCTAACCATACAGACACGCTAGATTTGTATCAAAGGGCGCGAAAATTAAGCTTTTAA 2757 0.4389 MRGLKLVERFKSTQVHALNSEATGRKNKATGGAITIRSLVSKSKSKTTTTSAVANLFVPLQLPSSDSLEPSIEPYLKPINLVEALAELYHRQECCLQSEKASLCVEQFTLLRGLGDQKLLRRCIRTARQNAADVLSKVVLSAWLRFERREDELEGVSSMDCGGCVIECPKENLVHGFSPFSINDRCQCPQVTKQETSTEENVCLCLPDEEKDVSFCIGGEEIDCVRWRIAALSDPFKTMLYGGFAESKMRKIVFSQNGICSKGMRAVELYSRAKRLDFFCPMTVLELLSFANRFCCEEMKAACDAHLASIVGSVDDALIFIDHGLEERAPLLVASCLQVLLRELPNSLCNSNLMNVFCSSQGRKRLAIVGYDSFLLYYFLSQVAMEESMVSKTAVMLLERLGECATERWQKALAFHQLGCVLLERKDYKEAQHSFEAAAEAGHLYSVAGVARSKYKQGQPYSAYKLISSLMFEHKPAGWMYQERALYNMGREKMFDLDVATELDPSLSFPYKYRALRKVEEKQIRAGILELDKIIGFKLSPDCLELRARMFIALKDYDSSIRDIRALLTLEPNYITSNEKITGKYLVHLLSHVVQEKSQAECWIQLYEQWSSVDDVGSLAIIHQMLENEPGKSLLEFRQSLLLLRLNCQKAAMRSLRMARNHSSSMQERLIYEGWILYDTGYRDEALARADRSITIQRSFEAYFLKAYVLADTSLDHESASYVIELLEEALKCPSDGLRKGQALNNLGSIYVDCGKLDLAKACYENALAIRHTRAHQGLARVYHQKNQRKAAFDEMTKLIEKAESNASAYEKRSEYCDRERAKVDLDVATQLDPLRTYPYRYRAAVMMDEQKESEAVEELTKAINFKPDLQMLHLRAAFYEAVGDLSSALQDCQAALCLDPNHTDTLDLYQRARKLSF 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00130 918 PANTHER ETO1-RELATED 1 916 IPR044631 GO:0010105
Spst8g00130 918 SUPERFAMILY POZ domain 205 308 IPR011333 -
Spst8g00130 918 Coils Coil 793 813 - -
Spst8g00130 918 ProSiteProfiles TPR repeat profile. 870 903 IPR019734 GO:0005515
Spst8g00130 918 SUPERFAMILY TPR-like 410 536 IPR011990 GO:0005515
Spst8g00130 918 Gene3D Tetratricopeptide repeat domain 817 917 IPR011990 GO:0005515
Spst8g00130 918 SUPERFAMILY TPR-like 724 911 IPR011990 GO:0005515
Spst8g00130 918 SMART tpr_5 412 445 IPR019734 GO:0005515
Spst8g00130 918 SMART tpr_5 870 903 IPR019734 GO:0005515
Spst8g00130 918 SMART tpr_5 741 774 IPR019734 GO:0005515
Spst8g00130 918 SMART tpr_5 541 574 IPR019734 GO:0005515
Spst8g00130 918 Gene3D Tetratricopeptide repeat domain 406 601 IPR011990 GO:0005515
Spst8g00130 918 Pfam Tetratricopeptide repeat 742 770 IPR019734 GO:0005515
Spst8g00130 918 ProSiteProfiles TPR repeat profile. 741 774 IPR019734 GO:0005515
Spst8g00130 918 Gene3D Potassium Channel Kv1.1; Chain A 204 325 IPR011333 -
Spst8g00130 918 SUPERFAMILY TPR-like 412 770 IPR011990 GO:0005515
Spst8g00130 918 Gene3D Tetratricopeptide repeat domain 637 803 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00130 Spst-Chr8 1074223 1078421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00130 742 902 Glycosyltransferase AT3G04240 27.485 7.12e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00130 - - gmx:100799963 1647.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00122 6 1393524 1396936 Spst8g00130 8 1074223 1078421 PCT