Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00127 ATGGCATTCAAGAAGTTCATAATCCGAAGCTACGAGGGTCATTCTGATAAAGCTCACGTAGAAGATCTTGAGAGAAGATGCAAAATAGGACCATCAGAAAGCGTGTTAGTCACTATGGGTGATCCTATGTGTAGGATTCGAAACAGCCCCATGTATATAATGCTGGTAGCAGAGATGGACAATGAATTGATTGGTGTCATTCAAGGCTTAATAAAAATGGTGACAGTTCATAGTCATCCTCCAAAAGATATGGCAAAGGTGGGGTATGTCTTAGGGCTCAGAGTTTCTCCCCATAGTAGAAGAAAAGGCATTGGCTCAGGTCTAGTGCATAGAGTAGAAGAATGGTTCAGTTCCAATGATGTAGAATATGCATACATGGCCACAGAGAAAGAAAACCATGTCTCGTTGAATCTCTTTATGAACAAATTTGGCTACACCAAGTTTAGGACTCCAACTATACTCGTAAACCCTGTGAATTATCACCCATTTCAAATCTCATCCAACATAGAGATAACTAAGGTCAAGGTTGAAAAGGCTGAATACCTCTATAGAAGGTTCATGGGAGCCACTGAGTTCTTCCCTAGTGATATACAGAATATACTTAAGAAAAAGCTAAGCTTGGGAACATGGGTGGCTAACTTCAAAGGGGATAGTGATTTTGGTTTAGATGGACAAGTTCCCAATAGTTGGGCCATGCTTAGTGTTTGGAACTGTGCAGAAATCTTCAAGCTAAGGTTAGGGAAAGCACCTTTGTCTTGCATGTTGTTCACAAAGAGTTGGGGTTTGATTGATAGAATCTTCCCATGCATGAAACTGCCAACCTTGCCCAACTTCTTCAGTCCTTTTGGGTTCTACTTCATGTATGGTGTGTACCAAGAAGGGCCATTCTCTGGGAAGTTGGTTAGGGCATTGTGTAAGTTCGTGCACAACATGGCTTCTAGGAGTGAACACTGCAAGATTATTGTGACAGAAGTTGGAGGAAGAGATGATCTGATTCATCATATTCCACATTGGAAATTGCTCTCATGTCAGGACATGTGGTGTATAAAGGCTTTGAAAAATGAAGTGAGTAACAAGTTTCATAAATTGACCAACGTTCCATCCCCAGGAGCTCTCTTCGTAGACCCACGCGAGGTCTAA 1140 0.4158 MAFKKFIIRSYEGHSDKAHVEDLERRCKIGPSESVLVTMGDPMCRIRNSPMYIMLVAEMDNELIGVIQGLIKMVTVHSHPPKDMAKVGYVLGLRVSPHSRRKGIGSGLVHRVEEWFSSNDVEYAYMATEKENHVSLNLFMNKFGYTKFRTPTILVNPVNYHPFQISSNIEITKVKVEKAEYLYRRFMGATEFFPSDIQNILKKKLSLGTWVANFKGDSDFGLDGQVPNSWAMLSVWNCAEIFKLRLGKAPLSCMLFTKSWGLIDRIFPCMKLPTLPNFFSPFGFYFMYGVYQEGPFSGKLVRALCKFVHNMASRSEHCKIIVTEVGGRDDLIHHIPHWKLLSCQDMWCIKALKNEVSNKFHKLTNVPSPGALFVDPREV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00127 379 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 16 149 IPR016181 -
Spst8g00127 379 CDD NAT_SF 54 125 - -
Spst8g00127 379 Gene3D - 5 150 - -
Spst8g00127 379 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 159 IPR000182 GO:0016747
Spst8g00127 379 Pfam Acetyltransferase (GNAT) family 45 145 IPR000182 GO:0016747
Spst8g00127 379 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00127 Spst-Chr8 1051174 1052457 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst8g00127 Acetyltransf_1 2.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00127 - - pvu:PHAVU_008G259100g 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00127 8 1051174 1052457 Spst8g00127 8 1051174 1052457 ECH
Spst6g00114 6 1313302 1314667 Spst8g00127 8 1051174 1052457 PCT