Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00122 ATGGCTTCGTGGGTGAGAGGGAAGTGCGTCGGGAAGGGGGCGTTTGGCGTCGTCAACGTCGCGGTTTCCAAAACCGATGGTCGCGTTTTCGCGGTGAAGTCCGTCGACTGTGGAGCGGGGCTCCCGAGTCAGGTGGAGGCGTTGGAGAACGAGATTCGGATTCTGAAACGCATGGCGTCGCCGCACGTGGTGGCTTATCTCGGCGACGACGTCACGTGCGAGACGGCGTCGTTCAGGAACCTTCATTTGGAGTACATGCCAGGTGGCACCGTCGCTGACCTGGACCGCGCTGACGTGGACGAGTGGTTAGTGAGGCGCTACGCGTGGTGCCTCGTGAGCGCGCTGCGTGACGTCCATGCGTGCGGCTTCGTGCACTGCGATGTCAAGGGGAGGAACGTGCTCCTCTCCCGCAACCGCGCCGCCGCGAAACTCGCTGATTTCGGCGCGGCGGTGGAACTCGAAGCGGAAGCCTCGCCGGAGTTATTGCCCCGGGGGAGTCCGATGTGGATGGCTCCGGAGGTGATGCGCCGGGAGCGGCAGGGGCCGGAGTCCGACGTGTGGTCGCTCGGTTGCACGATCATCGAGATTTTCACCGGGAAACCGGCGTGGGAGGATCGCGGCGTCGACACGCTGAGTCGAATCGGTTATTCGGGAGAGTTGCCGGAGTTTCCGAGCAAATTGTCGGAGCTGGGGAAAGATTTTCTGGAGAAGTGTCTGAGAAGAGAATCGAGTGAACGGTGGAGCTGCGATCAGCTGCTGCAGCATCCATTTTTGCTTCCCTACACTGTAGTTGAATCGTCGCCTCGATGCGTGTTGGATTGGGTTGAGTCGGAGTTCGCCGAGTCAGACTACAGCGACCGTGAACAAGAGCAAGTGCGGTTAGAATTTAGCAGTTTAGAAAATTCATTTAAAGATAGAATCAGTAAACTAGCAACAGTGTCGAGGGTAAATTGGGAAACGCAGGGTTGGGTAGTGGTGAGGGAGGTTGAGCTGAACGAATCATCATCATCATCATCGTCATCAACACAAATGGAAACAGAAGAAGGGGTAAACTGGGAATTGAGCAATGCGGTGAGGGTAGGGAGTGATCTGGAATGTTGGCATGGTGGAGGGTTTAATCGTGAAATAGGAAAGTTGGGTGAAGAAGAGTGTAACAGAGGTGGAGGGTATGGGTTGGAAAAGTTGGGTATTGTTAGGGGAAGATTGAGCATTTACAGTTGTAAAAATTTGATGTGGTGTTATTTAATGTTCTCGATGTATTTAAATATATTACGGTTTTCAATTATATGGTGTTTACTTTTTTTACTGCACGTGATTGAAAAGGGACTAAGAGATTTGGGGTGTGAAAATATTAACTGGAAAGGTGTATGCAATGAATTGAGTTGGGTGGTGTGA 1395 0.5297 MASWVRGKCVGKGAFGVVNVAVSKTDGRVFAVKSVDCGAGLPSQVEALENEIRILKRMASPHVVAYLGDDVTCETASFRNLHLEYMPGGTVADLDRADVDEWLVRRYAWCLVSALRDVHACGFVHCDVKGRNVLLSRNRAAAKLADFGAAVELEAEASPELLPRGSPMWMAPEVMRRERQGPESDVWSLGCTIIEIFTGKPAWEDRGVDTLSRIGYSGELPEFPSKLSELGKDFLEKCLRRESSERWSCDQLLQHPFLLPYTVVESSPRCVLDWVESEFAESDYSDREQEQVRLEFSSLENSFKDRISKLATVSRVNWETQGWVVVREVELNESSSSSSSSTQMETEEGVNWELSNAVRVGSDLECWHGGGFNREIGKLGEEECNRGGGYGLEKLGIVRGRLSIYSCKNLMWCYLMFSMYLNILRFSIIWCLLFLLHVIEKGLRDLGCENINWKGVCNELSWVV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00122 464 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Spst8g00122 464 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 4 345 - -
Spst8g00122 464 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00122 464 Gene3D Transferase(Phosphotransferase) domain 1 2 343 - -
Spst8g00122 464 FunFam Serine threonine protein kinase putative 2 311 - -
Spst8g00122 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Spst8g00122 464 Pfam Protein kinase domain 6 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00122 464 SUPERFAMILY Protein kinase-like (PK-like) 4 326 IPR011009 -
Spst8g00122 464 CDD STKc_MAPKKK 3 258 - -
Spst8g00122 464 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00122 Spst-Chr8 988075 989469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00122 4 363 MAP Kinase Kinase Kinase AT1G07150 55.163 1.56e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst8g00122 Pkinase 1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00122 - - gmx:100776227 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00122 8 988075 989469 Spst8g00122 8 988075 989469 ECH
Spst6g00108 6 1233908 1235281 Spst8g00122 8 988075 989469 PCT