Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00121 ATGTCTTGCTCCGTCGCGGTTTCCAATTCGCCGGTCTTTTCTCCCTCCTCTTCCCTCTTCTGCTCCAAGCCTTCCATCATCTCTTCTTCGCCCGAATCGCTTTCGCTCTCTCTCTCGCACCTCAAACCTTCCAACTCTAATACGGCGTCGTCTTGCTCCTCTTCTTGTTCTTCTCCTTCTGCTGCTGCTTCCTCTCCTTCTTCTCCTTTTCGGCTTCGCCTTCCCAAGCCTCCCTCCGTCTTCTCTGCGTCATCTGCTTCGTCCACGTCCCCCAACGGCGCCGTTTTGAAGAGGAAGCGACCAGCCAGACTGGACATACCCGTTTCTTCTCTCACCTTTGGGGTTCCGCCCACGCCCTCCGCGGCGGTGCGTGACGTAGTCGAGGTGGAGGAGGATGGGTTTGGGGTGTACTGCAAGAGAGGGAGGAGGGAACATATGGAGGATCGTTACACCGCTGGGGATAATCTACGCGGTGAACACAAACTGGCTTTATTTGGCATATTTGATGGACACGGAGGTGCAAAGGCTGCTGAATTTGCTGCAAATAACTTAGGAAAGAATATCTTAGATGAAGTGATTGTGAGAGGTGAAGATGAAGTTGAGGAGGCAGTGAAGCGTGGGTACCTCAACACAGACTCTGATTTCCTAAAGGAGGATCTCCATGGTGGCTCTTGCTGTGTGACTGCAATGATTAGGAATGGCAACCTTGTTGTGTCCAACGCCGGTGATTGCCGTGCTGTCATTAGCAGAGGAGGTGTTGCTGAGGCCCTAACATCCGATCACAGACCTTCAAGGGAAGATGAAAGGGACAGAATTGAGAGCCTGGGTGGCTATGTTGATTTATGCCGCGGTGTTTGGAGGATCCAGGGATCTCTTGCTGTGTCTAGGGGAATTGGAGATAGACACCTGAAACAATGGGTGACAGCAGAACCTGAAACCAAAGTTCTCAGAATTGAACCTGAGCATGACTTGTTAATCTTAGCTTCAGATGGACTATGGGATAAGGTCAGTAATCAGGAAGCAGTAGACATTGCTCGTTCTTTTCTTGTCGGGAACAAATCACAACCAGTGCTGGCTTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCTATGGATGATACAAGTGTTATGCTAATCAAATTAGAACACTACGTTTAA 1164 0.4966 MSCSVAVSNSPVFSPSSSLFCSKPSIISSSPESLSLSLSHLKPSNSNTASSCSSSCSSPSAAASSPSSPFRLRLPKPPSVFSASSASSTSPNGAVLKRKRPARLDIPVSSLTFGVPPTPSAAVRDVVEVEEDGFGVYCKRGRREHMEDRYTAGDNLRGEHKLALFGIFDGHGGAKAAEFAANNLGKNILDEVIVRGEDEVEEAVKRGYLNTDSDFLKEDLHGGSCCVTAMIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIESLGGYVDLCRGVWRIQGSLAVSRGIGDRHLKQWVTAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARSFLVGNKSQPVLACKKLVDLSVSRGSMDDTSVMLIKLEHYV 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00121 387 Gene3D - 125 386 IPR036457 -
Spst8g00121 387 SMART PP2C_4 123 381 IPR001932 -
Spst8g00121 387 MobiDBLite consensus disorder prediction 36 71 - -
Spst8g00121 387 ProSitePatterns PPM-type phosphatase domain signature. 164 172 IPR000222 GO:0043169
Spst8g00121 387 SUPERFAMILY PP2C-like 134 384 IPR036457 -
Spst8g00121 387 MobiDBLite consensus disorder prediction 36 67 - -
Spst8g00121 387 CDD PP2Cc 133 383 IPR001932 -
Spst8g00121 387 ProSiteProfiles PPM-type phosphatase domain profile. 133 383 IPR001932 -
Spst8g00121 387 PANTHER PROTEIN PHOSPHATASE 2C 67 381 IPR015655 GO:0004722|GO:0006470
Spst8g00121 387 Pfam Protein phosphatase 2C 134 375 IPR001932 -
Spst8g00121 387 MobiDBLite consensus disorder prediction 80 99 - -
Spst8g00121 387 MobiDBLite consensus disorder prediction 80 94 - -
Spst8g00121 387 FunFam probable protein phosphatase 2C 25 126 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00121 Spst-Chr8 967566 969480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00121 1 387 PP2C-type Phosphatase Gene Family AT2G30020 64.444 3.47e-167 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00121 K17506 - gmx:100797934 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00121 8 967566 969480 Spst8g00121 8 967566 969480 ECH
Spst6g00107 6 1225696 1227816 Spst8g00121 8 967566 969480 ECH
Spst6g00107 6 1225696 1227816 Spst8g00121 8 967566 969480 PCT