Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00112 ATGAAGCTCTTGACAACACCATCTTATTCATCAACCCCATCATCTTCATCCACCCTCCGATTGGATCCATCTTTGTGCAACTCCAAAAGTGCCTCTGCAGGGTGTCTCACTGCCATCTTGCGCAGGATTCTCTGCTCTGGTGGCCTTCCAACACACCCATCCGACCAAATAAAAGAACTTGATTCAGAGTCAAAGATGAGTGGCAAAGTTCAAGAATTGAAGTCTAAACAAAACGATGAATCTACCACCACTAGTCGTATTACTCCTGGGTTAGTGGAAAGATTAATGGGTTTGGAATCAATGGGGGAGAGAGAGAGACCCATTGAATCAAGTTCTTCACTTACACGTAGCAAATCCATGAACTCTATGGACTGCTTGGGGGAATGCAAGCGAATGGAGGGTCTTCACAATCGTGCTAAATCTTCATCATTCCGCGAGGTCCCAACTTTTCTTGAAAATGAAAACTTTTTGATACTCAGCTTCGAAAGTGGATGTAATGGTGGAGAATTCAGGTCCAAAGAGAGAAAAAAAGAAAAGAGTTTAAAAGAGAGAAGAGAGTTCAAAAAAAATAAGAGAGAAAAGGTGCATGATGACAAGGGGAACTTGTCTGACATGTCTTCTGCGGATGTTGGAAATGATGATGAACACAAAATTCAATTTGCCAACACTTGTACACTGTTCATGGCTTGTTTTGAAAAGGAGTACCTTGATTCAGAAACGGCAAGACGTTCACACCCCATGCAGATCAAGGAAGTAGCCAATGGTGAGAAAGTGAAGAGGAGGAAGAAGGGACCAACATGTTATTCGGAAAAGAAGGTGGACACTGAATGTAGTTCAGAAGATTCAAGTCCGGTTTCTATCTTTGATTTTGAGCGTGAAGCTCCTGGAACAGATGTGGATTCTTATGGTGTTGATACGAGTTGGAGAAGAAAATTGTCACCAGAGCTTGAAAATGACAAACTTTGTGTTCTGCATTGTGATAGTAACATGATAATTGAGGAGGAGATGAAGGTAGAGAACAGCAAACATGAAAGGTCTAAGAGAAAAGAGAAGCAAAGCCAAGAGTGTGTAGATATTTGGGGAGAAATTTGTAGGCTAGTTGAAGGTGAATTGGGATCAAACAAGTTAGAGGCAGGATTGAGGAAAAAATGTGATTTTGAAAGTTTATGTGCAGATTTTGAGTCAGAAATTTTTGATCAATTGTTACATGAGTTCATAGATGAACTTGCTGGGAATCACTTGAAAGCATTGCAACTTCAAAATATGTAA 1269 0.405 MKLLTTPSYSSTPSSSSTLRLDPSLCNSKSASAGCLTAILRRILCSGGLPTHPSDQIKELDSESKMSGKVQELKSKQNDESTTTSRITPGLVERLMGLESMGERERPIESSSSLTRSKSMNSMDCLGECKRMEGLHNRAKSSSFREVPTFLENENFLILSFESGCNGGEFRSKERKKEKSLKERREFKKNKREKVHDDKGNLSDMSSADVGNDDEHKIQFANTCTLFMACFEKEYLDSETARRSHPMQIKEVANGEKVKRRKKGPTCYSEKKVDTECSSEDSSPVSIFDFEREAPGTDVDSYGVDTSWRRKLSPELENDKLCVLHCDSNMIIEEEMKVENSKHERSKRKEKQSQECVDIWGEICRLVEGELGSNKLEAGLRKKCDFESLCADFESEIFDQLLHEFIDELAGNHLKALQLQNM 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00112 422 MobiDBLite consensus disorder prediction 169 210 - -
Spst8g00112 422 MobiDBLite consensus disorder prediction 53 84 - -
Spst8g00112 422 MobiDBLite consensus disorder prediction 1 22 - -
Spst8g00112 422 MobiDBLite consensus disorder prediction 56 76 - -
Spst8g00112 422 PANTHER OS05G0128300 PROTEIN 11 412 - -
Spst8g00112 422 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00112 Spst-Chr8 882123 883784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00112 28 410 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.873 2.16e-21 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00112 - - gmx:102660974 558.14