Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00104 ATGAGCACCTACTCTGAGGGCACCACATCACAACCAATGGCAAGCACCATAAAGGATGAAGATTTGGAGAACAACAATGAGAAGACAGCAATGGTGAGGAAGAAGTCAGAAGTAGTTGTGGTGGCAAGTAGTAATGGTCGTCTCGAAATGCTTAGGAGTTTGATGACGAATTTGCAAGTGGTGTTTCTTGGCACTAAGCTGGTTGTGCTTTTTCCAGCAGTCCCTTTGGCTGTTGTTGCAAGTTTCTATGGCTTTGGAAGGCCTTGGATTTTTGCTTTCAGCCTCCTTGGACTTGCTCCTCTAGCAGAGCGTGTGAGCTTCCTCACTGAGCAAATTGCATATTATACTGGTCCAACAGTTGGAGGGCTTCTGAATGCAACTTGTGGAAATGCAACTGAGATGATCATAGCATTATTAGCACTTCATCAGAACAAAGTGAATGTTGTGAAGTTGTCCCTGCTTGGTTCCATTCTCTCAAACCTTCTCTTGGTTCTTGGCAGTTCACTCCTCTGTGGTGGTTTAGCCAATCTCAAGAGAGAGCAAAGATATGACAGAAAACAGGCTGATGTAAACTCACTGGTTTTGTTGATGGGGTTGCTGTGCCATTTGCTGCCATTGTTGTTCAGATACGCCATAGGAGGAGCCCATCAATCCATAGCCACTCACACTCTTCAGTTGTCCAGAGCAAGCAGTATTCTTATGCTTCTAGCATACCTTGCTTACATCTTCTTCCAATTAAAAACTCACAGAAAATTGTTTGAGGCACAAGAGGAGGAGGAAGATGAAGAGAAGGCTGTGATAGGATTTTGGAGTGCATTTACGTGGTTGGTGGGTATGACATTGGTCATTTCTGTACTTTCTGAATATGTTGTGGGAACCATAGAGGCTGCTTCAGATTCATGGGGCATTTCTGTAAGCTTCATTAGCATAATTTTGCTACCTATAGTTGGAAATGCTGCAGAACATGCTGGTTCAATCATATTTGCTTACAAGAACAAGTTGGACATATCTTTGGGTGTTGCTATGGGATCTGCAACTCAAATTTCTATGTTTGTGGTTCCATTAAGTGTGGTTGTTGCATGGATAATGGGTATAAAAATGGATTTGGATTTCAGTCTTCTTGAAACTGGGTGTCTTGCTTTTACCATTTTAGTTACAGCCTTCACTTTGCAGGATGGAACTTCACACTACATGAAAGGAGTGGTTCTTACTCTGTGTTACATTGTCATTGCTGCATGTTTTTTTGTTCTCGAAACTCCCCTAACAGGTAAGTATGCATATATTGAGTGA 1290 0.4225 MSTYSEGTTSQPMASTIKDEDLENNNEKTAMVRKKSEVVVVASSNGRLEMLRSLMTNLQVVFLGTKLVVLFPAVPLAVVASFYGFGRPWIFAFSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEMIIALLALHQNKVNVVKLSLLGSILSNLLLVLGSSLLCGGLANLKREQRYDRKQADVNSLVLLMGLLCHLLPLLFRYAIGGAHQSIATHTLQLSRASSILMLLAYLAYIFFQLKTHRKLFEAQEEEEDEEKAVIGFWSAFTWLVGMTLVISVLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKLDISLGVAMGSATQISMFVVPLSVVVAWIMGIKMDLDFSLLETGCLAFTILVTAFTLQDGTSHYMKGVVLTLCYIVIAACFFVLETPLTGKYAYIE 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00104 429 FunFam Vacuolar cation/proton exchanger 262 416 - -
Spst8g00104 429 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 18 418 IPR004713 GO:0006812|GO:0008324|GO:0016020
Spst8g00104 429 Gene3D - 266 416 IPR044880 -
Spst8g00104 429 Gene3D - 118 265 IPR044880 -
Spst8g00104 429 Pfam Sodium/calcium exchanger protein 89 246 IPR004837 GO:0016020|GO:0055085
Spst8g00104 429 Pfam Sodium/calcium exchanger protein 272 413 IPR004837 GO:0016020|GO:0055085
Spst8g00104 429 NCBIfam calcium/proton exchanger 72 415 IPR004798 GO:0006816|GO:0015369
Spst8g00104 429 MobiDBLite consensus disorder prediction 1 25 - -
Spst8g00104 429 NCBIfam calcium/proton exchanger 53 415 - -
Spst8g00104 429 MobiDBLite consensus disorder prediction 1 19 - -
Spst8g00104 429 FunFam Vacuolar cation/proton exchanger 118 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00104 Spst-Chr8 826094 828849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00104 25 420 Antiporters AT2G38170 65.594 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00104 K07300 - gmx:100802344 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00085 6 1009240 1016386 Spst8g00104 8 826094 828849 PCT