Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00092 ATGCAAATGGAGACCTTTCCTCTCTTCCTCACTTTAACAGCAACTCTCTCAGCCTACCTCCTCTGGTTCCTCCTCCTTACCCGAACCCTAACCGGTCCAAAACTACTCCCCTTCCTCGGCAGCCTCCCGTCGCTCTTCAAAAATCGCCACCGCGTCCATGACTGGATAGCCTCCAACCTCCGCGCCGCAGGCGCCTCCGCCACCTACCAAACGTGCATCATCCCCCTGCCCTTCTTGGCGCGCAGGCAAGGGTTTTACACTGTCACGTGCCACCCCAAGAACCTCGAGCACGTCCTACGCACGCGTTTCGACAACTACCCCAAGGGCCCCAGGTGGCACGCCGCCTTCCATGACCTCCTCGGCCACGGCATCTTCAACAGCGACGGCGAAACCTGGCTCATGCAGCGCAAAACCGCCGCACTGGAGTTCACAACACGCACTCTGAAATATGCCATGTCTCGTTGGGTTAATTGCTCAATCAAGAACCGGTTGTGGTGCATCATGGACAAAGCGCAGAAAGATAGAGTCTCCGTGGACTTGCAAGACCTTCTCCTGCGCTTGACCTTTGATAATATCTGTGGACTCACCTTCGGTAAAGACCCCGAAACTCTTTCGCCGGAGCTTCCCGAAAACCCCTTCGCCGTTGCTTTTGACACTGCCACTGAGGCCACCATGCACAGGTTCCTCTATCCAGGTCTGGTGTGGAGGTTCCAGAAGCTTCTGTGCATCGGATCCGAGAAGAGGTTAAAGGATAGCCTTCGCGTGGTGGAAACTTACATGAACGACGCCGTTGCGGATCGCAGGGAAACTCCTTCCGACGACTTGCTCTCACGTTTCATGAAGAAGCGCGACGCCAGCGGCAACCCCTTCTCCGCCACCGCGCTCCAGCGTATTATCCTCAACTTTGTCCTCGCCGGCAGGGACACCTCATCGGTGGCCCTCACCTGGTTCTTCTGGCTCCTCATGAACCACCCTCACGTCGAGGAAAAAATCATGAACGAAATAACCACCGTCCTCGCCGACACGCGAGGCGGAGACCGCAGCAGGTGGACGGAGGACCCCCTCGATTTCGGTGAGGCGGACCGGCTGGTGTACCTGAAGGCAGCGCTGGCGGAGACGCTGCGTCTATACCCGTCGGTGCCGCAGGACTTCAAGCAGGCCGTCGCCGACGACGTGTTGCCGGACGGCACCTTTGTTCCGGCTGGGTCGACGGTGACCTACTCGATATACTCGGCGGGGAGGGTGGAAACGATTTGGGGCGAGGATTGCATGGAGTTTAAACCGGAGAGGTGGCTTTCGGTTCGCGGGGACCGGTTCGAACCCCCAAAAGATGGGTTCAAATTCGTGGCTTTCAACGCTGGACCGAGAACTTGTTTGGGCAAGGACTTAGCATATCTTCAGATGAAATCAGTCGCCGCCGCTGTGCTCTTGCGTTATCGGCTATCTCTGGTTCCCGGTCATCAGGTGGAGCAGAAGATGTCTCTCACTTTGTTCATGAAGAATGGGCTCAAAGTGTTATTGCATCCACGTAAGCTTCAAGGTGGCCCGGGAGTTCCCACGTCATCATAA 1569 0.5692 MQMETFPLFLTLTATLSAYLLWFLLLTRTLTGPKLLPFLGSLPSLFKNRHRVHDWIASNLRAAGASATYQTCIIPLPFLARRQGFYTVTCHPKNLEHVLRTRFDNYPKGPRWHAAFHDLLGHGIFNSDGETWLMQRKTAALEFTTRTLKYAMSRWVNCSIKNRLWCIMDKAQKDRVSVDLQDLLLRLTFDNICGLTFGKDPETLSPELPENPFAVAFDTATEATMHRFLYPGLVWRFQKLLCIGSEKRLKDSLRVVETYMNDAVADRRETPSDDLLSRFMKKRDASGNPFSATALQRIILNFVLAGRDTSSVALTWFFWLLMNHPHVEEKIMNEITTVLADTRGGDRSRWTEDPLDFGEADRLVYLKAALAETLRLYPSVPQDFKQAVADDVLPDGTFVPAGSTVTYSIYSAGRVETIWGEDCMEFKPERWLSVRGDRFEPPKDGFKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLLRYRLSLVPGHQVEQKMSLTLFMKNGLKVLLHPRKLQGGPGVPTSS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00092 522 FunFam Cytochrome P450 25 513 - -
Spst8g00092 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Spst8g00092 522 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 Gene3D Cytochrome P450 26 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 Pfam Cytochrome P450 87 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 CDD CYP86A 70 503 - -
Spst8g00092 522 SUPERFAMILY Cytochrome P450 23 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst8g00092 522 PANTHER CYTOCHROME P450 23 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00092 Spst-Chr8 754248 756162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00092 3 510 Cytochrome P450 AT5G58860 73.725 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00092 K15401 - gmx:100788343 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00092 8 754248 756162 Spst8g00092 8 754248 756162 ECH
Spst6g00064 6 852870 854634 Spst8g00092 8 754248 756162 PCT