Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00077 ATGCATGAGACCTTCCCTTATTTAGATACAAGAAATGATTTGGTCTTTCAATATCTCTGGCATCTCCAAATGAAGAAAACACCATCCCCCAATTTGCATCAATCTAGCCAAAGGAAACAGAATGCTAATCTCCAACTTTTTGCTGCAACCAATGATGCGAAGAGGCGCAATCCTAAGACCAGTTTTACACTGAAATCTTTCAAGTATGCTGTCAAGAAATGTGCTCAAGTTTTTTCATTGTTTCTCAATGGCAAAAGAAAATCAGCCTCATATCTGGTTCGAAATGATGACAGAAAAAATACATCTAAAGTCATAAGGGTGGCATCATCATCAACTGATTTATCTTCTTCTGAGAGTAACACCAAGAATTCATCAAAATGGAAGTTTTCTTATTCCTACGCATCATCTAGCACTGCAAGTGGACAACTTAGAATCGGCAACTTCTCCTTCGAAGAAATTTACAAGTCAACTGCAAAATTCTCTCCAGGTAATGAAATTGGACAAGGCGGCTTTGGAACAGTCTACAAGGGAAAGCTTAATGATGGATCTATTGTTGCCGTGAAGCGTGCCAAGAAGGAAGTAATACACAGTCACTTACATGAGTTCAAGAATGAAATATACACCTTGTCTCAAATAGAGCATCGGAATCTTGTGAGGTTGCATGGATATTTGGAAGATGAAAATGAGAAGATCATTGTTGTTGAATATGTTGGTAATGGTAACCTTCGAGAACACCTTGATGGGATTCGGGGAGAAGGATTAGAAATAGGGGAGCGTCTAGACATAGCAATTGATGTAGCTCATGCAATAACTTACCTTCATATGTACACAGATAATCCAATTATCCATAGAGACATCAAAGCATCAAACATCTTAATTACTGAGAACCTAAAGGCCAAAGTGGCAGATTTTGGTTTTGCACGGTTGTCTGATGATCCCACAGCAACTCATATTTCAACTCAAGTTAAAGGAACCGCTGGATACATGGATCCTGAGTATCTTCGAACATATCATCTCACTGAAAAAAGTGATGTTTATTCCTTTGGTGTATTGCTTGTTGAAATGGTGACAGGAAGACATCCAATAGAAGCGAAGAGGCCCCTTGATGAAAGAGTGACAATCAGATGGGCACTGCAGATGCTGAAACAAGGGGATGCTGTATTTGCCATGGACCCTAGGCTGAAAAGAAGTCCAGCCTCCATCAAGGTAGTAAAGCAGGTTCTCAAACTAGCTCTACAATGCGTTGCTCCTTTGAAACAATCACGGCCACCTATGAAGAATTGTGCAGAGGTTCTGTGGGAAATCCGCAAAAGTTTTAGAGATGAAGCCAATTCTGATCATCCTTCCCTTCCTTCTCACCATTCTGCAATTTTTCCTCAAAGGGAAAAGAATAAGCATAAAATGTTTGGCATTGAAGATGATAGCAGCTATAAATTTGTCTCTGCACCTAATCATATTCGTTCATAA 1467 0.3954 MHETFPYLDTRNDLVFQYLWHLQMKKTPSPNLHQSSQRKQNANLQLFAATNDAKRRNPKTSFTLKSFKYAVKKCAQVFSLFLNGKRKSASYLVRNDDRKNTSKVIRVASSSTDLSSSESNTKNSSKWKFSYSYASSSTASGQLRIGNFSFEEIYKSTAKFSPGNEIGQGGFGTVYKGKLNDGSIVAVKRAKKEVIHSHLHEFKNEIYTLSQIEHRNLVRLHGYLEDENEKIIVVEYVGNGNLREHLDGIRGEGLEIGERLDIAIDVAHAITYLHMYTDNPIIHRDIKASNILITENLKAKVADFGFARLSDDPTATHISTQVKGTAGYMDPEYLRTYHLTEKSDVYSFGVLLVEMVTGRHPIEAKRPLDERVTIRWALQMLKQGDAVFAMDPRLKRSPASIKVVKQVLKLALQCVAPLKQSRPPMKNCAEVLWEIRKSFRDEANSDHPSLPSHHSAIFPQREKNKHKMFGIEDDSSYKFVSAPNHIRS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00077 488 Pfam Protein tyrosine and serine/threonine kinase 163 432 IPR001245 GO:0004672|GO:0006468
Spst8g00077 488 Gene3D Transferase(Phosphotransferase) domain 1 237 454 - -
Spst8g00077 488 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 124 236 - -
Spst8g00077 488 SMART serkin_6 160 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00077 488 ProSiteProfiles Protein kinase domain profile. 160 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00077 488 Gene3D Phosphorylase Kinase; domain 1 117 236 - -
Spst8g00077 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Spst8g00077 488 SUPERFAMILY Protein kinase-like (PK-like) 142 435 IPR011009 -
Spst8g00077 488 CDD STKc_IRAK 166 435 - -
Spst8g00077 488 ProSitePatterns Protein kinases ATP-binding region signature. 166 192 IPR017441 GO:0005524
Spst8g00077 488 PANTHER OS01G0750732 PROTEIN 14 443 - -
Spst8g00077 488 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 237 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00077 Spst-Chr8 613018 616124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00077 132 435 Receptor kinase-like Gene Family AT1G79620 45.016 1.66e-74 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Spst8g00077 PK_Tyr_Ser-Thr 6.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00077 - - gmx:100811511 763.837