Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00074 ATGGGTTACTTATGTGATTTTTGTGGAGACCAGAGGTCATTGGTGTACTGCCGCAGTGATGCTGCATGCTTATGTTTGTCGTGTGATCGAAATGTTCATTCTGCTAATGCCCTTTCTAGGCGTCATTCGAGAGCCCTTCTCTGTGAGAGATGTAATTCACAACCAGCTTTTGTGAGGTGTGTTGAAGAGAAAATTTCACTTTGTCAGAACTGTGATTGGTTGACTCATGGTACCTCACCGACTTCTTCGACACACAAGAGGCAAACAATCAATAGCTACTCTGGCTGCCCTTCAGCTGCAGAATTTTCTTCAATATGGTCCTTTTTCTTAGATATCCCTTCTATGGGTGATGCATGTGAACAGGAACTGGGTTTGATGAGCATTAATGAGAATGGCAACAAGAGTGATTGGGTTCCTCCTGAAGGGCTGAATGTGTCTGGTTCAGTTCAAGTGACAGATCTACCCAGCAAAGGTAAATCTTGGGCTGGCACATCTTCAATACCTGAGTCAAGCTCAGAACCTCGTATTCTGGACCAGCCGCCTGGTGCCAATGAATGTTTGCCCAAGTTGTACTGTCCTGGGAAAAAATTTTCTGGGATATGTGAAGATGATAATCTATATGATGATTTCATCATGGATGAAGTGGATCTAGAACTTGAGAACTACGAGGAACTTTTTGGGATGGCTCTCAGTCATTCTGAAGAGCTTTTTGAAAATGGTGGAATTGATAGCTTATTTGAAACAAAGGACATGTCTGCTAGTGCTGGTGATTCCCATTGTCAGGGTGCTGTTGCTGCTGAGGGATCGTCTGCTGGGTTGGTCAATGCTATCCAACCTGCATGCAGCACTGCAGCATCTGCAGATTCAATTTTGAGTACAAAAACTGAACCCATTGTTTGTTTTACGACAAGGCAATCTCAATCAAACATTTCTTTTTCTGGTGTTACCAAAGAGAGTGCTGCTGAATATCAAGATTGTGATGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCCTGGTGTCCTCCTTGCCCTGAGAGTTCTCTGCATTCTGCCAACCGTAGCAATGCTGTCATGCGCTATAAGGAAAAGAAGAAGACCCGGAAGTTCGAGAAGAAAGTGAGGTATGCCTCCCGCAAGGCTAGGGCTGATGTCAGAAGGCGTGTGAAGGGCCGGTTTGTTAAAGCCGGTGATGTCTATGACTATGACCCTTTGAGCCAAACCAGAAGCTGCTGA 1233 0.4493 MGYLCDFCGDQRSLVYCRSDAACLCLSCDRNVHSANALSRRHSRALLCERCNSQPAFVRCVEEKISLCQNCDWLTHGTSPTSSTHKRQTINSYSGCPSAAEFSSIWSFFLDIPSMGDACEQELGLMSINENGNKSDWVPPEGLNVSGSVQVTDLPSKGKSWAGTSSIPESSSEPRILDQPPGANECLPKLYCPGKKFSGICEDDNLYDDFIMDEVDLELENYEELFGMALSHSEELFENGGIDSLFETKDMSASAGDSHCQGAVAAEGSSAGLVNAIQPACSTAASADSILSTKTEPIVCFTTRQSQSNISFSGVTKESAAEYQDCDASSMLLMGEPPWCPPCPESSLHSANRSNAVMRYKEKKKTRKFEKKVRYASRKARADVRRRVKGRFVKAGDVYDYDPLSQTRSC 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00074 410 MobiDBLite consensus disorder prediction 155 173 - -
Spst8g00074 410 Pfam CCT motif 353 395 IPR010402 GO:0005515
Spst8g00074 410 CDD Bbox1_BBX-like 47 90 - -
Spst8g00074 410 MobiDBLite consensus disorder prediction 155 179 - -
Spst8g00074 410 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 397 - -
Spst8g00074 410 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Spst8g00074 410 CDD Bbox1_BBX-like 4 47 - -
Spst8g00074 410 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Spst8g00074 410 ProSiteProfiles CCT domain profile. 353 395 IPR010402 GO:0005515
Spst8g00074 410 SMART bboxneu5 4 47 IPR000315 GO:0008270
Spst8g00074 410 SMART bboxneu5 48 90 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00074 Spst-Chr8 600059 604986 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00074 1 409 C2C2-CO-like Transcription Factor Family AT3G07650 54.588 9.02e-147 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Spst8g00074 CCT 2.4e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00074 - - gmx:100783016 741.88