Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00070 ATGTCTGGTCATTGTTGCGAGTGCTTCTTAATATCCTTGGCTATCAATTTACCTGATTTGGCGACTGTGACTAAAATGGACGAAGCATTATGCGTCATCTTTAATTTCATATTTGTTAGAAACAAGGTCAAAATAGTGACAGATGGTGCTATGCCTCCACTGGTGGAGCTCCTCAAGATGCAAAATAATGGTATAAGAGAATTAGCTACAGCTGCAGTCTTGACACTCTCAGCTGCTGCATCCAACAAACCCATTATTGCTGCTTCTGGAGCCGCACCTTTCCTTGTTCAGATTCTCAAATCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAGCTCTCCATAATCTTTCTACCAGCATTGAGAATTCCATTGAACTTCTTGATCCAAGTGCTGTTTTCCCTCTGATCAATCTTCTTAAAGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAAGCCACAGCACTGCTTGAAATCCTTTCCAACTCCGAAGAAGGGCGAATTGCAATCTCAATTGCAGATGGTGGAATCTTAACTCTAGTAGAGACAGTTGAAGACGGATCACTTGTCAGCACAGAACATGCTGTAGGAACTCTGCTAACATTATGTCGAAGCAGCCGAGATAAATACAGGGAACTGATTCTTAAAGAAGGAGCGATTCCGGGTCTTTTACGTCTGACCGTGGAGGGCACGGCTGAAGCTCAAGATAGAGCACGTGCGCTTCTGGATTTGCTCAGAGATTCTCCCTCAGAAAAGAGACTAACCTCATCAGTTTTGGAGAAAATTGTTTATGACATTGCTGAACGGGTAGATGGTGCAGATAAAGCTGCTGAAACTGCCAAACGGTTGTTGCAAGATATGGTTCAGAGGAGTATGGAACACAGCATGAAATGCATCCAGCATAGGGCTGCATCTTGCACACCTTCTATTCCTTCCACTTGA 942 0.4331 MSGHCCECFLISLAINLPDLATVTKMDEALCVIFNFIFVRNKVKIVTDGAMPPLVELLKMQNNGIRELATAAVLTLSAAASNKPIIAASGAAPFLVQILKSGSVQGKVDAVTALHNLSTSIENSIELLDPSAVFPLINLLKECKKYSKFAEKATALLEILSNSEEGRIAISIADGGILTLVETVEDGSLVSTEHAVGTLLTLCRSSRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARALLDLLRDSPSEKRLTSSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEHSMKCIQHRAASCTPSIPST 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00070 313 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 131 175 IPR000225 GO:0005515
Spst8g00070 313 Gene3D - 11 260 IPR011989 -
Spst8g00070 313 SMART arm_5 79 119 IPR000225 GO:0005515
Spst8g00070 313 SMART arm_5 163 204 IPR000225 GO:0005515
Spst8g00070 313 SMART arm_5 38 78 IPR000225 GO:0005515
Spst8g00070 313 PANTHER U BOX DOMAIN-CONTAINING 28 247 - -
Spst8g00070 313 SUPERFAMILY ARM repeat 11 255 IPR016024 -
Spst8g00070 313 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 49 91 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00070 Spst-Chr8 553901 555051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00070 41 247 U-box Gene Family AT3G54790 40.865 7.16e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00070 K08332 - gmx:100782472 473.396