Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00056 ATGAGTCACATAGAGGGAGAAGCAATGAAGGCAGAGAAAATGAGAACTCTGAAGGAATGGTTCACTTCATCCCAGGTTCTATGCAGCATGTTGCTAGTGCAAATTTTTGTATCTGGGATGCAGTTGCTATCAAGGGTCATATTGGTTCAAGGAACTTTCATTGGTGCACTTATTGTTTATCGTCACCTTGTTGCTGCTATTTTTGTTGCCCCCTTTGCACTCTACTTTGAAAGAGGTCGCCCAAAGAAGTTCAATTGCAAGGTTTGGTTTTGGCTCTTCATTAATGCACTAATGGGGATGGCCCTGGCTCAGGGATTGTTCTATTATGGTCTGCGAGACACATCAGCAACTTACTCTATCAATTTTCTCAACTTGGTTCCTATAAGCACTTTCATTACCTCTATCATATGCAGAATGGAGAATCTGAAGTTGCAGACATGGGTTGGTAAAGCTAAGTCTGGAGGGGCAATTTTGTGTCTTGGAGGAGCATTAGTGAAGTTGCTTAAAGTGTTTCCATTGAGGTATTGGGGAACAATGGTATCATGCATTCTAGCAGCAATTCAAGCAGCAATAGTAGGTAGTTTCTTAGATGCAAGTAACGCTGCTTGGAGAATAGAGTTGAATCTACAACTCATCGCTGTACTTTATTCGGGTGCACTGGCCACTGCTGCTACGTTCTGCATGCTATCTTGGGCAATAACAATCAAAGGACCAAGTTATCCTCCAATGTTTAATCCCCTTTCTCTTATCTTTGTGTCCTTTTCAGAGGCTATCTTACTTGGAGAACCGTTAGGAGTTGGAACGTTGGTTGGCATGGTTTTGATCATAATGGGATTGTACTTGTTCTTGTGGGGCAAAAAGAAGGACACACAGAGCTTGGCTCAACCAAATGTTGCAGATGCAGAAGGATCAACCATGATGGGTGATGGGCTCAGTGCAGCCCAATCAGCATCCACAGTCGTAACAAGTGCTTCACCCACAGATTCTGTGGTTCTTCAAGTTGAAAAAGACTGA 1014 0.43 MSHIEGEAMKAEKMRTLKEWFTSSQVLCSMLLVQIFVSGMQLLSRVILVQGTFIGALIVYRHLVAAIFVAPFALYFERGRPKKFNCKVWFWLFINALMGMALAQGLFYYGLRDTSATYSINFLNLVPISTFITSIICRMENLKLQTWVGKAKSGGAILCLGGALVKLLKVFPLRYWGTMVSCILAAIQAAIVGSFLDASNAAWRIELNLQLIAVLYSGALATAATFCMLSWAITIKGPSYPPMFNPLSLIFVSFSEAILLGEPLGVGTLVGMVLIIMGLYLFLWGKKKDTQSLAQPNVADAEGSTMMGDGLSAAQSASTVVTSASPTDSVVLQVEKD 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00056 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 60 157 - -
Spst8g00056 337 SUPERFAMILY Multidrug resistance efflux transporter EmrE 205 288 - -
Spst8g00056 337 PANTHER WAT1-RELATED PROTEIN 166 290 IPR030184 GO:0016020|GO:0022857
Spst8g00056 337 Pfam EamA-like transporter family 28 150 IPR000620 GO:0016020
Spst8g00056 337 Pfam EamA-like transporter family 178 283 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00056 Spst-Chr8 441526 445988 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00056 9 291 Nodulin-like Gene Family AT5G07050 26.667 1.38e-39 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00056 - - gmx:100782551 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00056 8 441526 445988 Spst9g01569 9 15940401 15952600 PCT