Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00055 ATGGAGGAAAAGAAAAAGAGGGGTTTGAAGGAGTGGTTCACATCATCACAGGTTCTACTGGGGATGATACTTGTGCAAGTTTTTGCAACTGGGATGCAGCTACTATTAAGGGTCATCTTGGTTGAGGGTTCCTTCATCTTTGCACTCATTGCATATCGTCATATTGTTGCTGCAATTTGTGTTGCACCTTTTGCTCTCTACTTTGAGAGGATGACTATGGCTCAAGGATTATTTTATTTTGGGCTGAGAGACACTACAGCTACTTACTCCGCCAGCTTTCTCAACTTGGTTCCAATATGCACCTTCTTTACCTCAATCATATTCAGATTGGAGACATTGGGGCTGCACACTTGGGCTGGTAGAGCTAAGTGTGGAGGAGCAATTCTGAGTGTTGGGGGAGCATTAGTTTCAAGTCTTTACAAAGGGAAAGGATTTTATCTTGGTCATCATAGTCATCATGCTCAAACTGCTGTTGCAGCACACCTTACTCACATGCTACGAGGCACTTTCTTTTTGATCTGCAGCTGTTTCTCATTAACAGCTTGGTTTCTTGCACAAGCTCAATTGTGTAAAGTATTTCCATTGAGGTATTGGGGAACAATGATATCATGCGTTTTGGCAACAATTGAAGCAGTAATCATAGGGGTTTGCATAGATTCCAGTAAAGCTGCTTGGAGATTAGAGTGGAATCTAGAACTGGTCACCATAGTGTACTCTGGAGCACTGGCTTCTGCTGCTACATTCTGCCTACTGTCTTGGGCAGTTGCAGTCAAAGGACCTTGTTATCCTCCAATGTTCAATCCCCTGGTTCTTATTTTTGTGGCCTTTTCCGAAGCTATCCTACTTGGAGAACAACTAACCGTTGGAACGTTGCTGGGCATGGTTTTGATCATGGTGGGGTTGTACTCCTTCTTGTGGGGAAAAAGCAATGAGACAAAGAGCACGGCTCAGCAACCAATTGAAGCAGCAGCAGAAGTATCAAACATGACTGATTTGATTGCCGCGGCGGAATCAGCTGCTACAGTAGTGCCAAGTTCTTCTCCAGTAAACATAGTAGATTTTAAACTTGAGATGCCTGACAAAAACTGA 1089 0.4353 MEEKKKRGLKEWFTSSQVLLGMILVQVFATGMQLLLRVILVEGSFIFALIAYRHIVAAICVAPFALYFERMTMAQGLFYFGLRDTTATYSASFLNLVPICTFFTSIIFRLETLGLHTWAGRAKCGGAILSVGGALVSSLYKGKGFYLGHHSHHAQTAVAAHLTHMLRGTFFLICSCFSLTAWFLAQAQLCKVFPLRYWGTMISCVLATIEAVIIGVCIDSSKAAWRLEWNLELVTIVYSGALASAATFCLLSWAVAVKGPCYPPMFNPLVLIFVAFSEAILLGEQLTVGTLLGMVLIMVGLYSFLWGKSNETKSTAQQPIEAAAEVSNMTDLIAAAESAATVVPSSSPVNIVDFKLEMPDKN 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00055 362 PANTHER WAT1-RELATED PROTEIN 18 315 IPR030184 GO:0016020|GO:0022857
Spst8g00055 362 Pfam EamA-like transporter family 167 304 IPR000620 GO:0016020
Spst8g00055 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00055 Spst-Chr8 422826 428367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00055 19 350 Nodulin-like Gene Family AT1G44800 30.056 3.72e-52 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00055 - - gmx:100792281 551.206