Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00054 ATGCTGAATTATTGGAACTTCTTTTGTTCCTTGCATTCAATGGCTTCTTCCCTATGCAATATCTTCCTCATACTTTGTTTGTTTAGTGTTCTGGCCTCCATAGGGCCATATCCAGCTGCAGTTCATTCGGCTGGTGATGTTCCAATTAATGTGACCAAGCACTTTTCCTTCTATAATTTCAGCTTCAGCAATAACCCCAGACTAGTCCATGATGTGAAGCTCCTAGGCAGTGCCAAGTTCTCAAATGAAAAGGGTTCTCTTCAAATCCCAAATGAGTCACTAGACACAGACCTAAGACACCAAGCAGGTAGAGGCATCTATTCCTTCCCAATTCGCCTGCTTGATCCAACCACCAAGACTCCAGCTTCCTTTCAAACAACTTTCTCTTTTCAAATGAACAATTCCACTGCCTCTGAGCAAGCTGCTTATGGAGGTAGTGGCCTCACTTTCATCATTGTCCCTGATGAGTTCACTGTGGGAAGGTCAGGGCCATGGCTTGGAATGCTCAATGATGCTTGTGAGAATGACTACAAGGCAGTGGCAGTGGAGTTTGACACAAGAAAGAACCCCGAGTTTGGAGATCCAAATGACAACCATGTTGGCATCAACTTAGGTACCATAGTATCTACCAAAGTTATCAATGTTTCTGATGTTGGAGTGTCCCTTAAAGATGGATTTGTTCATCGCGCTTGGATCACCTATGATGGTCATCAAAGGAGCATGGACATTCGTCTTGGAAGGGCCAACGAAGAGGATTATCCTTCCACACCTATCTTCTCAGAAGATGTGGATCTCTCTCCTTATCTAAATGAGTACATGTTTGTGGGGTTCTCAGCCTCCACAGGTAACCATACACAAATCCACAACATACTTTCTTGGAACTTCACTTCCACAAGCCAAGCTTTTCTCCGCTTCCCTTCATCTGAAACCTGCCAGGGTAAGATCTTACTTGAGAATAGTACAGCATCACCAACAACTGAGAAATCTTCCAAGAGTGAGCCACCAAGAAGCTTTTTGATTTTTATGGCTGCTGTGGCATTGGCTCTGGTCCTTTTCCTTGGCTTTTACTTCATCAGTAAGCATAGGAGAAATACTTCCAAATTAAACACTTCAGTGGAGACAGAGATTCACTTGCCAAGGCCTCCAAACAAACCACGCCGCTTCACATTTTCTCAACTTTCATCTTCAACTCGGTCATTCAGTGAGATAGAGTTGCTTGGCAGTGATTCTAGAGGAGAATACTACAGAGGAAAGCTTTCTAACGGAAGCCAGGTGGCTGTGAAAAGGTTCTCAACTCAGTTTCTCCATACACATGGATCAGACAAGAAGCGTTTGTTGAAGGAAATCAAAGGCATTGGTCATGTTCGCCATCCGAATTTGCTTCCTGTCAGAGGTTGGTGTCAAGACAACCATGAAATCATGGTGGTCTATGACTTTGTTCCCAATGGCAGCCTAGACAAATGGTTATTTGGGGCTGGTGTTCTTCCATGGACTAGGAGGTTCAAAGTTATTAAGGATGTAGCTGATGGCTTGAGCTTCCTCCACTCTAAGCAACTAGCCCACAAAAACTTGAAATGCAGCAGTGTGTTTCTAGATGTCAACTTCAGAGCTGTTTTGGGTGATTTTGGGTTTGTGCTGCTGGGGGCAGAGTCAAAACAGTTTGAGTCAGCAGTGTGTCATGGTGCAGATGTGTTTGAATTTGGTGTCCTTGTGTTGGAAGTAATAGCCGGAAGAGTAAGGGATGAGAAAGAGGAGGGAAATACAGAAGAGAGGAACCTATTGGATTATGCTTGGAACTTGCATCAGATTGATGAGAAAGTTAAGCTGGTGGACAGAAGGATGGGATCATTGATCAACTTGGAGCAGGCAATTCGTGTTCTAGAAATTGGGTTGCTTTGCACTCTGAATGAGAACAAAGGAAGACCCTCAATGGAGCAAGTGGTGGAGTTTCTTCTAAACATGGATAAGTCCATTCCTGAACTGCCAAGAACTCGCCCTGTTTCCTTGTTCCCCTATAATAGCGCCAACACAGGTCTTTGCAACACATATTCTTGCACCTTTTGA 2064 0.4404 MLNYWNFFCSLHSMASSLCNIFLILCLFSVLASIGPYPAAVHSAGDVPINVTKHFSFYNFSFSNNPRLVHDVKLLGSAKFSNEKGSLQIPNESLDTDLRHQAGRGIYSFPIRLLDPTTKTPASFQTTFSFQMNNSTASEQAAYGGSGLTFIIVPDEFTVGRSGPWLGMLNDACENDYKAVAVEFDTRKNPEFGDPNDNHVGINLGTIVSTKVINVSDVGVSLKDGFVHRAWITYDGHQRSMDIRLGRANEEDYPSTPIFSEDVDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAFLRFPSSETCQGKILLENSTASPTTEKSSKSEPPRSFLIFMAAVALALVLFLGFYFISKHRRNTSKLNTSVETEIHLPRPPNKPRRFTFSQLSSSTRSFSEIELLGSDSRGEYYRGKLSNGSQVAVKRFSTQFLHTHGSDKKRLLKEIKGIGHVRHPNLLPVRGWCQDNHEIMVVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHSKQLAHKNLKCSSVFLDVNFRAVLGDFGFVLLGAESKQFESAVCHGADVFEFGVLVLEVIAGRVRDEKEEGNTEERNLLDYAWNLHQIDEKVKLVDRRMGSLINLEQAIRVLEIGLLCTLNENKGRPSMEQVVEFLLNMDKSIPELPRTRPVSLFPYNSANTGLCNTYSCTF 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00054 687 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 362 479 - -
Spst8g00054 687 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 52 305 - -
Spst8g00054 687 Gene3D - 52 305 - -
Spst8g00054 687 ProSitePatterns Legume lectins beta-chain signature. 180 186 IPR019825 -
Spst8g00054 687 Pfam Legume lectin domain 54 300 IPR001220 GO:0030246
Spst8g00054 687 CDD lectin_legume_LecRK_Arcelin_ConA 54 298 IPR001220 GO:0030246
Spst8g00054 687 PANTHER - 84 652 - -
Spst8g00054 687 ProSiteProfiles Protein kinase domain profile. 400 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00054 687 Pfam Protein tyrosine and serine/threonine kinase 404 545 IPR001245 GO:0004672|GO:0006468
Spst8g00054 687 SUPERFAMILY Protein kinase-like (PK-like) 377 651 IPR011009 -
Spst8g00054 687 FunFam Lectin-domain containing receptor kinase A4.2 480 659 - -
Spst8g00054 687 Gene3D Transferase(Phosphotransferase) domain 1 480 555 - -
Spst8g00054 687 Gene3D Phosphorylase Kinase; domain 1 359 479 - -
Spst8g00054 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 56 299 IPR013320 -
Spst8g00054 687 Gene3D Transferase(Phosphotransferase) domain 1 556 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00054 Spst-Chr8 410152 412575 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00054 76 666 Receptor kinase-like Gene Family AT5G03140 33.228 1.13e-92 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst8g00054 Lectin_legB 8.7e-58 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00054 - - gmx:100807767 1199.88