Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00033 ATGGCCACCAACCAAGGTGTCCTCTCAACACTTGACAAAACCAAGACACAAACCTACCACTACAAAGCAATTGTGATAGCCGGGATGGGGTTCTTCACTGATGCATATGATCTATTTTGCATCACTGCAGTTATTAAGCTCATAGGTCGGTTGTACTACTATGACCCCATTAGTCACAGTCCAGGGAAGCTTCCAAGGAATGTAAACAATGCAATAACAGGTGTTGCATTGTGTGGCACCCTTGCAGGGCAGCTCTTCTTTGGCTGGCTGGGTGACAAACTCGGTCGAAAAAGGGTTTATGGCCTAACACTTGCCACCATGGTGGGGTGTGCCTTGGCATCAGGGCTTTCTTTTGGATCCACAGCCAAAAGTGTGGTTGCTAGTCTTTGCTTCTTCAGGTTCTGGCTAGGATTTGGCATAGGAGGAGACTATCCTCTCTCAGCTGTTATAATGTCCGAATATGCCAATCAAAAGACCAGGGGAGCTTTTGTTGCTGCTGTTTTTGCTATGCAAGGGGTGGGAATATTGGTTGCTGGAGGTGTAGCCATGGTGGTCTCCAAACTGTTCCTATTAGCTTATCCAGCCAATGTTTTCGCATCTGATTCAGTGCAATCCACTCAGCCACAAGGAGACTTCGTTTGGAGAATAGTGCTCATGTTTGGTGCATTTCCTGCTGCCTTCACTTATTACTGGAGAATGAAAATGCCAGAAACTGCAAGGTATACTGCCTTAGTGGAAGGAGATCACAAGAAAGCTGTTGAAGATATGGCCAAAGTTCTTCAAAATGATATACCTTTAGAAGAATCAAATACCAGGGTTTCTGCCACAACTAGCCCCTCTTATGGATTCTTCTCTTCAAAGTTTCTTGAGAAGCATGGCCTTCACCTTCTAGGAACAACTAGCACCTGGTTCTTGTTGGATATTGCCTTCTACAGTCTTCAGCTAACGCAAAAAGATATTTACCCTGCAACTGGACTTGTATTCAGAGCTTCCCAAATGAATGCCATAGAGGAGGTGTTTCGGCTCTCCAAAGCAATGTTTGCAGTGGCACTGTTTACCACTGTCCCTGGATACTGGTGCACAGTGTACTTCATTGACAAAATTGGAAGGTACAAAATCCAACTTGGTGGATTTTTTGTGATGTCTGTTTGCATGTGGTTTTTGGGACAAAAATACGGAGAATATAGGGGACATGAATGCAACTCGCATGAAAAGTATGAGTATTGTGGCGGAAACCACACCATGTTTGTCATTCTTTTTGGAGTCACCCTTTTCTTTGCAAACTTTGGACCCAATGCCACAACATTTATTGTGCCAGCAGAGCTGTTCCCTGCCAGGTTCCGTTCAACATGCCATGGGATATCAGCAGCAGCTGGTAAAGCAGGAGCTATCATTGGTGCTTTTGTGGTGCAAAGCTATACAGATAATGCAGAAGACAAAATAAAAGGTATGAAGATAGCACTTATGATACTTTCAGTTGTCAATTTGCTAGGATTCTTCTGCACTTTCTTAGTACCAGAAACAAGAGGACGGTCACTTGAAGAAATCTCAGGGGAAGATAAAGGACTCCCTGGCAATATTGCTCAAGACAATGCAAACGAGACAACAACTGATACAGAAAAGGGAACAAAAAACTCTGATGTTGGCAAACTTCCAGAAACCTTAGTGGTCTAG 1674 0.4391 MATNQGVLSTLDKTKTQTYHYKAIVIAGMGFFTDAYDLFCITAVIKLIGRLYYYDPISHSPGKLPRNVNNAITGVALCGTLAGQLFFGWLGDKLGRKRVYGLTLATMVGCALASGLSFGSTAKSVVASLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGAFVAAVFAMQGVGILVAGGVAMVVSKLFLLAYPANVFASDSVQSTQPQGDFVWRIVLMFGAFPAAFTYYWRMKMPETARYTALVEGDHKKAVEDMAKVLQNDIPLEESNTRVSATTSPSYGFFSSKFLEKHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPATGLVFRASQMNAIEEVFRLSKAMFAVALFTTVPGYWCTVYFIDKIGRYKIQLGGFFVMSVCMWFLGQKYGEYRGHECNSHEKYEYCGGNHTMFVILFGVTLFFANFGPNATTFIVPAELFPARFRSTCHGISAAAGKAGAIIGAFVVQSYTDNAEDKIKGMKIALMILSVVNLLGFFCTFLVPETRGRSLEEISGEDKGLPGNIAQDNANETTTDTEKGTKNSDVGKLPETLVV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00033 557 SUPERFAMILY MFS general substrate transporter 11 517 IPR036259 -
Spst8g00033 557 Pfam Sugar (and other) transporter 24 517 IPR005828 GO:0016020|GO:0022857|GO:0055085
Spst8g00033 557 Gene3D MFS general substrate transporter like domains 19 533 IPR036259 -
Spst8g00033 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 509 IPR020846 GO:0022857
Spst8g00033 557 MobiDBLite consensus disorder prediction 515 557 - -
Spst8g00033 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 515 - -
Spst8g00033 557 FunFam Inorganic phosphate transporter 1-6 19 531 - -
Spst8g00033 557 CDD MFS_PhT 24 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00033 Spst-Chr8 294009 295682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00033 1 519 Inorganic Solute Cotransporters AT5G43350 62.004 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00033 K08176 - gmx:100820250 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00033 8 294009 295682 Spst8g00033 8 294009 295682 ECH