Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00032 ATGGTTTCCTCTCAGTTCTCTGTCTTAAATGGAAATAGTTCATCAAGGTCTTTCCTGAATCAGTTGGTTCTACCAAATGGTCCACCTGATCTTTTGCCATCTTCGACTTGTGAGGATTTTGATTTTTCTGATGTGTTTGGTCCATCTCCTGTTGAAGCCTCAATAACACTAAGCTCCGAGAAACATGGAGATTCCGTAGCTACACGAGGTTCAGATGAAAAGATTTACAACGATCCTGATTGCATTCACATCCGCTCTCAATCTTTATTGGCTCCCATAACTTGTATTGGTCAGTCATTGCAGCTTAGCAAGCTCACCTTACATGAGACAGAAGATGAATTGGATCTTGAGGAGGTCTTAATAGAAACACAGAAAGAACTTAAGGAACATTCTGTTAACAATGCAGCAGTGGAGAAAAATAATTTATACTTCAATGATTATTGTCTGAATAATCAGACTATTGGAGTTGAGGATTTTGAAGTTTTGAAGGTTGTTGGGCAAGGTGCTTTTGGAAAGGTGTATCAGGTGAGGAGGGCAGGTAGTTCTGAAATATATGCTATGAAGGTGATGCGCAAGGATAAGATCATGGAGAGAAACCATGCTGAATATGTAAAATCTGAAAGGGATATACTGACAAAGGTGGACAACCCATTTGTTGTGCGGCTCAGATACGCTTTCCAAACCAAATATAGGCTGTACCTTGTGCTTGATTTTGTCAATGGTGGCCACCTTTTCTTTCAGCTCTATCACCAAGGCCTATTCAGGGAAGATTTGGCACGCTTCTATGCTGCAGAGATTATTTGTGCCGTTTCTTATCTTCATGCAAATCATATAATGCACAGGGATCTTAAGCCTGAAAATATTCTTCTCGATGCAGATGGTCATGCACTGTTAACAGATTTTGGCCTGGCTAAGAAATTCAATGAGACTGAAAGATCTAATTCTATGTGTGGAACTGTAGAGTACATGGCCCCTGAAATTGTAATGGGAAAAGGCCATGATAAGGCAGCTGATTGGTGGAGTGTGGGAATTTTAATATATGAAATGCTTACAGGAAAGCCTCCTTTCGCGGGCGGAAATAGACATAAGATCCAGCAGAAGATAATTAAAGACAAAATCAAGCTCCCAGCATTTTTGTCAAATGAAGCACATTCACTGTTAAAAGGGCTGTTGCAGAAAGATGTCAGCAAACGCCTTGGCAGTGGATTAAGAAGCAGTGAGGAGATTAAAAGCCACAAGTGGTTTAAGTCAGTTAACTGGAAAAAACTGGAAGCCCGTGAAATTAGGCCAAGCTTTGTCCCTAATGTTGCTGGGAAGCACTGTGTTGCTAACTTCGAGGAGCGGTGGACTACTATGCCTTTGGTGGATTCTCCAGCTTCTAGTCCCAAAAAGGATGACAATACCTTCAAGAAGTTCTCATATACTGGTATTCCAATCGAGTAA 1443 0.4096 MVSSQFSVLNGNSSSRSFLNQLVLPNGPPDLLPSSTCEDFDFSDVFGPSPVEASITLSSEKHGDSVATRGSDEKIYNDPDCIHIRSQSLLAPITCIGQSLQLSKLTLHETEDELDLEEVLIETQKELKEHSVNNAAVEKNNLYFNDYCLNNQTIGVEDFEVLKVVGQGAFGKVYQVRRAGSSEIYAMKVMRKDKIMERNHAEYVKSERDILTKVDNPFVVRLRYAFQTKYRLYLVLDFVNGGHLFFQLYHQGLFREDLARFYAAEIICAVSYLHANHIMHRDLKPENILLDADGHALLTDFGLAKKFNETERSNSMCGTVEYMAPEIVMGKGHDKAADWWSVGILIYEMLTGKPPFAGGNRHKIQQKIIKDKIKLPAFLSNEAHSLLKGLLQKDVSKRLGSGLRSSEEIKSHKWFKSVNWKKLEAREIRPSFVPNVAGKHCVANFEERWTTMPLVDSPASSPKKDDNTFKKFSYTGIPIE 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00032 480 CDD STKc_AGC 165 415 IPR045270 GO:0004674|GO:0005524
Spst8g00032 480 Gene3D Transferase(Phosphotransferase) domain 1 239 434 - -
Spst8g00032 480 PANTHER RIBOSOMAL PROTEIN S6 KINASE 114 475 - -
Spst8g00032 480 FunFam Non-specific serine/threonine protein kinase 156 261 - -
Spst8g00032 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Spst8g00032 480 Coils Coil 120 140 - -
Spst8g00032 480 SMART serkin_6 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00032 480 ProSiteProfiles AGC-kinase C-terminal domain profile. 416 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst8g00032 480 ProSitePatterns Protein kinases ATP-binding region signature. 165 188 IPR017441 GO:0005524
Spst8g00032 480 SMART pkinase_C_6 416 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Spst8g00032 480 FunFam Non-specific serine/threonine protein kinase 239 434 - -
Spst8g00032 480 Gene3D Phosphorylase Kinase; domain 1 157 458 - -
Spst8g00032 480 ProSiteProfiles Protein kinase domain profile. 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00032 480 SUPERFAMILY Protein kinase-like (PK-like) 144 461 IPR011009 -
Spst8g00032 480 Pfam Protein kinase domain 159 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00032 Spst-Chr8 285502 293134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00032 1 478 AGC Kinase Gene Family AT3G08720 62.656 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Spst8g00032 Pkinase 1.3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00032 K04688 - gmx:100803509 811.216