Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00025 ATGGATATGAATCAATTGTTTGCTTCAATTAATCTGATGAATGTATCTGAACACACTGTTAAATGTGATGTTTGCCTTCAGACTCCACCCCAGATTGCATCAGATGGCCTATGGGGAGGACATAGCACAGAAGGGTCACCTTTAAGGTCATCTATGCCAGTCTTTCTACTTCAAGTCGTTTTAATTTATACTATAACACGAGCTTTACATTTCCCTTTGAAGAAGTTTGGTTTTCCTGCTATGATTTCACAATTGATGGCTGGGCTCATTATAGGACCATCATTGAACATATTGGAGAAAGAGAAGACAATGATGTTTCCTTATGGAAGTCAAGATACACTCGCTACAATAGCATCACTTGGTTATATGCTATTTGTCTTTGAGAATGGTGTAAAAATGGATTTTAGCATGATCACCAGAACAGGAAGACTTGGATGGATCATTGCCCTTGTAGGGTTGTTATTTCCTCTACTAATGGGTTATTCATCTATAGGATGCATTTCTGCAATTATAACCCGGGATATACCAGAAAATGCGCATTCATCTGTTGTTATATTGATGACACAGAACATGAATTCATTTGCAGTGATTGCTTCCGTCCTCAATGACCTTCAAATCCTAAACTCTGAACTCGGAAGATTGGTATTATCTTCTGCACTGGTGGGTGACACATTAAGTAATATACTTGTAGTTACATCTGCAGTCTTTGATAAAAACAAGGAGGTGAATGCAATTGGTGTAAAATTGGTGTTCATTTTCGTCCTAATAATCTTCATTTTCTTTGTCTATCGTCCGTTAATGTTCTGGGTGATTGAGCACACACCAGAAAGTCAAGAAGTGAAGGATATTTACATTAACATTGTCATTGGGTTTCTCTTTGTTTTGGGTTGGTGTTCAATGCTCTTCAATCTAGAGTTCATCCTTCTACCTTTCCTTTATGGATTGGCTACACCAGATGGACCTCCATTAGGATCTTCATTGATTAAAAAGATTCATTTTTTTGGTTTAGAATTTCTTATGCCAATCTTCGTGACTACATGTGCAATGAAGATGAATTATTCCTTGGTAGAGCTCACATCACCCATAATTATAAGCACTACCACTATCATCCTTTCGGGTCATCTAATGAAAATGATAGCTTACATAGCATCCTCACTCTATTTCAAGCTACCACGAAGGGATGCGCTGGCTCTTGCCCTCCTTCTAAATTGCAAAGGTGTTGTGGAAGTAGCCATGTATAGCTCTGCATTGGACAAAAGAGACATTCAACCAGCACATTATACGGTGATTGTAACAATGATCATGATCTCAAATAGCATCGTTCACTTGACAGTGAAACGGTTGTATGACCCTTCAAGGAAGTATTTTGGTTTGCAGAAGAGGAACATATTCAATTTAAAACTCGACACAAATCTCAGAATGCTAGTTTGCATTCATAAACAGCATCACATAATACCTATCATCAGAGTTCTTGATTTGTGTAATCCTACACCATTATATCCAATCACTGTCGATGTTTTGCATCTAATTGAACTAGTAGGGCGCTCCACCCCTATTTTCATTTCTCATAGGAAGAAGAAAGATGTTTCTTCTCACACAAGAAACTCTTACTCCGAGAATATCATTCTTTCTTTCAAAATCTATGAAGATGAAAAGTTAGGTGCAACATCAATAAACCCTTATACAGCCATATCTCCACCTACTCTAATGCACGAAGACGTGTGCTACCTTGCATTGGATAAAGTTGCATCGATCATCATTCTTCCTTTTCATCGAAAATGGTCCTTTGATGGAAAAATTGAACACGAGGACAAGACAGTGAGGTTACTGAATTGTAGGGTCATGGAGAGAGCTCCATGCTCGGTTGGAATATTAGTGACTCGTTCAACTCATCCAAAAGATTCACCACTTCGGTTAGCCATGATCTTTTTGGGTGGAAACGACGATAGAGAGGCTTTGTGCTTAGCCAGTAGAGCAGCCAAAGACTCTGGTATTGTTAACCTTGTGGTATATCACATTACAAGCAAAAATGGAGAAGAAATTGAAGACATGGAGAGTATGCTTGATCGCGTAATATTGAAAGATGCTGAAAAAGAATGTTCAAGGTTGAAAAATGTTGTTTTTAAGGAAATAACAGTGGAGGGTGGTGCCCACATAGCTTCTATTCTTCGTCAAATGACAGATGATCATGACTTTTTTATAGTTGGGAGACGCCATGGTATTGATTGTCCTCAAACAAAGGGACTTCATGAATGGACTGAGTTTTCAGAATTAGGTCTCGTAGGTGATTTTCTTGCTTCTGCAGATCTTGATTGCAAATCATCTGTTTTGAAAACCCCCACATGGACTTGGGCTTGGGCCGGGGCCGTCCGACCCGGGTTGTACATTTGGGTTGAAAAGCTTGGCTTTGTTCATTTTCCCTACAAAATAACCGAAATGGAAGCACATCCAAACGCAGTCTCCATGCTGAGAGGCAGAACTATAGCACCACCTCCTCCACCATTACTCATCCTCAGTGCAAGGCTTTCGTCACCGTCACCGTCACCGTCACCGATACTTTCATCGTCACCCTCCGTTACTGCCTTGGAACCCACACTATCGTGTTCTGCAACCCCGAAACCTTGGTTCCTCCGTTTTTCCTTCTTCTTCAATTCTCAAACTCTTCAAACCATGACGCTCTCCAAGTGCTTCTCTCACTCTGGGCCAACCGTTCCCATTCCGAGCCCATCCGGATCCGGATCCGGATCCGAACCCGAACCCAAATCCCCTCTCATGGTGGTTTCCTTCTACAAATTCGCGGATTTCCCCGACCATGCTCTCATGCGAAACCCCTTGAAGCAACTCTGTCAACGCCTGCGTGTTTCAGGTGGAATTATTCTTGCGCCTGAAGGGATCAATGGCAGCATATGTGGGACTCCCGATTCGGTGCAGGATGTACTTGCATTTGTGGAAAGTGATGATAGATTGAAGGGGCTACGGCAAGCGGAATCACCTGTCAGTCCTGAGGATGAGGCCATCCATCATGGACATAGTCCCGCTTCTCCTCTTGCTGCGGGGGAAGATGCACCCTTCCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTTACTCTTGGGATGCCTACTGTGTCCCCTATTGAAAGGGTTGGAAAGTATGTTGGCCCAGAAGAGTGGAATGCTTTGATTAGTGATCCAGATACAGTGGTTATTGATGTGCGAAATAACTATGAAACCAGAATAGGGAAGTTTAAAGGAGCAGTTGATCCATGTACTACATCATTTCGTGAATTCCCATCATGGGTAGAGGAGCATTTCCAACTTGACGAAACATATGATGGTGAGCATCCAAAAGTTGAGGTAAACAATTCAGCCCAACCTGTTGAAGAAGAAATGGACAATAAAAAACAACATATGCCACGTGTTGCAATGTATTGCACTGGAGGTATTCGTTGTGAGAAAGCTACAAGTCTACTTCTCACCAAAGGTTTCAAAGAGGTTTATCACCTTGAAGGTGGAATTCTAAAATATCTTGAAGAGGTTCCAGAGACAGAGAGCCTCTGGGAAGGGGAGTGCTTTGTTTTTGACAAACGAGTCTCTGTAGAGCATGGCTTGGTTCCAGGAACTTTCAAACTCTGCTATGGTTGTAAACAGCCTGTGAGTGATGCTGACATGGAAGCCCCGGAATTTGAACAAGGAGTCTCTTGTCCATACTGTTTTGCACTGAAATCTGATGAAGTGAAGGAGAGAGCTCGAGCTCGACAAAGACAATTTGAGAGATGGGGAATCATAGGTGGTCCAGATAAGGGTCGCCGCCCAGCAACTCAGCAACCGGCAAGTGTTGGCAGTAATTCAAATCAGCTTTCACGTTCCATTTAA 3882 0.4207 MDMNQLFASINLMNVSEHTVKCDVCLQTPPQIASDGLWGGHSTEGSPLRSSMPVFLLQVVLIYTITRALHFPLKKFGFPAMISQLMAGLIIGPSLNILEKEKTMMFPYGSQDTLATIASLGYMLFVFENGVKMDFSMITRTGRLGWIIALVGLLFPLLMGYSSIGCISAIITRDIPENAHSSVVILMTQNMNSFAVIASVLNDLQILNSELGRLVLSSALVGDTLSNILVVTSAVFDKNKEVNAIGVKLVFIFVLIIFIFFVYRPLMFWVIEHTPESQEVKDIYINIVIGFLFVLGWCSMLFNLEFILLPFLYGLATPDGPPLGSSLIKKIHFFGLEFLMPIFVTTCAMKMNYSLVELTSPIIISTTTIILSGHLMKMIAYIASSLYFKLPRRDALALALLLNCKGVVEVAMYSSALDKRDIQPAHYTVIVTMIMISNSIVHLTVKRLYDPSRKYFGLQKRNIFNLKLDTNLRMLVCIHKQHHIIPIIRVLDLCNPTPLYPITVDVLHLIELVGRSTPIFISHRKKKDVSSHTRNSYSENIILSFKIYEDEKLGATSINPYTAISPPTLMHEDVCYLALDKVASIIILPFHRKWSFDGKIEHEDKTVRLLNCRVMERAPCSVGILVTRSTHPKDSPLRLAMIFLGGNDDREALCLASRAAKDSGIVNLVVYHITSKNGEEIEDMESMLDRVILKDAEKECSRLKNVVFKEITVEGGAHIASILRQMTDDHDFFIVGRRHGIDCPQTKGLHEWTEFSELGLVGDFLASADLDCKSSVLKTPTWTWAWAGAVRPGLYIWVEKLGFVHFPYKITEMEAHPNAVSMLRGRTIAPPPPPLLILSARLSSPSPSPSPILSSSPSVTALEPTLSCSATPKPWFLRFSFFFNSQTLQTMTLSKCFSHSGPTVPIPSPSGSGSGSEPEPKSPLMVVSFYKFADFPDHALMRNPLKQLCQRLRVSGGIILAPEGINGSICGTPDSVQDVLAFVESDDRLKGLRQAESPVSPEDEAIHHGHSPASPLAAGEDAPFRWDHVRVKLKKEIVTLGMPTVSPIERVGKYVGPEEWNALISDPDTVVIDVRNNYETRIGKFKGAVDPCTTSFREFPSWVEEHFQLDETYDGEHPKVEVNNSAQPVEEEMDNKKQHMPRVAMYCTGGIRCEKATSLLLTKGFKEVYHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGTFKLCYGCKQPVSDADMEAPEFEQGVSCPYCFALKSDEVKERARARQRQFERWGIIGGPDKGRRPATQQPASVGSNSNQLSRSI 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00025 1293 SMART rhod_4 1055 1184 IPR001763 -
Spst8g00025 1293 Gene3D - 1039 1220 IPR036873 -
Spst8g00025 1293 Pfam Sodium/hydrogen exchanger family 59 439 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst8g00025 1293 MobiDBLite consensus disorder prediction 1261 1293 - -
Spst8g00025 1293 CDD RHOD_YceA 1052 1180 - -
Spst8g00025 1293 Pfam UPF0176 acylphosphatase like domain 925 1037 IPR040503 -
Spst8g00025 1293 Pfam Rhodanese-like domain 1058 1180 IPR001763 -
Spst8g00025 1293 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 1034 1213 IPR036873 -
Spst8g00025 1293 Gene3D - 914 1038 - -
Spst8g00025 1293 MobiDBLite consensus disorder prediction 994 1017 - -
Spst8g00025 1293 Hamap tRNA uridine(34) hydroxylase [trhO]. 922 1224 IPR020936 -
Spst8g00025 1293 ProSiteProfiles Rhodanese domain profile. 1065 1187 IPR001763 -
Spst8g00025 1293 MobiDBLite consensus disorder prediction 1277 1293 - -
Spst8g00025 1293 Gene3D - 53 455 IPR038770 -
Spst8g00025 1293 PANTHER CATION/H + ANTIPORTER 30 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00025 Spst-Chr8 239300 247405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00025 924 1277 Sulfurtransferasese or Rhodanese AT2G40760 76.056 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00025 - K26731 gmx:100784321 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00025 8 239300 247405 Spst8g00025 8 239300 247405 ECH