Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00024 ATGAACTTTTTCCCTGAAAGTGAAAGTGTCTCAGCCCAGAAGAAGAGAGTGATATTGAAAGAGCTTGTGAAGGGTCGGGAAGCTGCTACCCAACTCAAGTTTCTGCTTCAGAATCCCTTTCGGAGTGAACCCTCTCTCTCTTCGCATGAACTCATGGCCAATATGTTCACATCTTTCACAAACGCTCTTTCTGTTATAAACACTTCTTCTGTGGAACCTGGTTCAGCAGATGGGGTGGCTCATCGGGATCTCCTGTTTTCTGGGGTAAATCTTTCGCCGGTACCCGATTCCGGCAATCATCCATCACCCGGAGATTGCAGTGGGAAGAGATCACAAAAGGGTGGGAGAGGTCGCTACAATAGAAGGAGGAGTGAAAAGACATGGACTGAACTATCCTGCACCACTGATGACAATCATGCATGGAGGAAGTATGGACAAAAGGGAATATTGAATTCTGAATTCCCTAGGAGTTACTTCCGGTGCAGTCATAAGTATGATCAAGGTTGCCGAGCAACAAAACAAGTGCAGCAGGATGAAGAGTATCCAGAGATGTACAGAACTACATATTTTGGCATTCACATATGCAAAGCCACTCCCAAGATTACTCATTCGGCCACAGATTCTTCCACTTGGGAATCGTATTTTCTGAATTCTGATCATGACTCTAATGTACAGGTTCCCCTCATTACCCCACCAATCTTAACTACAGACCAAGAATTTCCCAAAGAAACTCACACATCAAGTGATCTTACAGATCACAAACTATTGGATCCTATCCTGTTGTCAGATTTGAAGGATTTTGAACCATCCAACCCCACCATTGTGCCCTTGGGGAAGGAATCTGATAACACTACTGCAGATAATGTATATTCATGCACAGACTCGCAACGTCTAGACATGGATTTTGAGGTGGCATTTGTTCATTTTGGCACTGACTTTCACTTTGAGGAAGGTCAATTGCTTTAA 966 0.4389 MNFFPESESVSAQKKRVILKELVKGREAATQLKFLLQNPFRSEPSLSSHELMANMFTSFTNALSVINTSSVEPGSADGVAHRDLLFSGVNLSPVPDSGNHPSPGDCSGKRSQKGGRGRYNRRRSEKTWTELSCTTDDNHAWRKYGQKGILNSEFPRSYFRCSHKYDQGCRATKQVQQDEEYPEMYRTTYFGIHICKATPKITHSATDSSTWESYFLNSDHDSNVQVPLITPPILTTDQEFPKETHTSSDLTDHKLLDPILLSDLKDFEPSNPTIVPLGKESDNTTADNVYSCTDSQRLDMDFEVAFVHFGTDFHFEEGQLL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00024 321 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00024 321 Gene3D WRKY domain 120 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g00024 321 ProSiteProfiles WRKY domain profile. 136 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00024 321 Pfam WRKY DNA -binding domain 136 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00024 321 MobiDBLite consensus disorder prediction 90 127 - -
Spst8g00024 321 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g00024 321 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 22 209 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00024 Spst-Chr8 227677 230095 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00024 14 261 WRKY Transcription Factor Family AT3G56400 36.759 3.20e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst8g00024 WRKY 1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00024 - - gmx:100796599 367.851
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00024 8 227677 230095 Spst8g00024 8 227677 230095 ECH