Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00023 ATGAATTACAACATGCTTTGTTCTGAGAGTGGAAGTCTCTCAGCAAGGAAGAAGAGAGAGATAATTAAAAAAATTGTTAAGGGTCAGAAAGCTGCTACTCAGCTCAAGATTCTGCTTCAAAACCCCTTTGGGACTGCACCCTCTCCCTCTTCTCACCAACTCATGACCAATGTCCTCACATCTTTCACACAAGCTCTTTCTATTATTCAATCTTCTTCTTCGCAACCTGGTTCTGCAAATGGGGTAGCTCGTCGGGATCTTCTGACTTCCGGTGCATACGGGTCGCCGTTGACCGGTTCCAGCCATGATCCAATGTCTGGACATTGCCGTGAGAAGAGATCCCAAAATGGTCGGAGAGAATTGGGTTACCGAGAAGGAGGATTTGACGAATTGGGATGTGTACGGAAGTACGGACGTAGTGTGTCACTGGTTTACATCAGTGAAAAGCGGTTTTCGAGGAAGGGTGCAGTGACATGGACCATTCTCTCTTCCACCACAGATGATGATCATGCATGGAGGAAGTATGGACAAAAGGGAATCCTGAATTCTGAATTTCCTAGGAGTTACTTCAGGTGCAGTTACAAGTATGATCAACGTTGTCAAGCAGTGAAACAGGTGCAGGTGGATGAAGATAATCCACGTATGTACCGAACTAAGTACATTGGTATTCACACATGCAATCCCACCCCTAATACGGCAACACACCCAACCACTTGGGAATCATATTTTCTGAATTCTGATCATGACTCTGATCCACGGGGTCCCCTCATTACCTCACCAACCTTATTTATAAAACAAGATTTTTCCAAAGAAACTCACACATCAAGTGATCTTACAGATCACAAACTATTAGATCCTATCATGTTGTCAGATTTGAAGGATTTTGAACTATCCAACCCCACCGTTGTGCCCTTGGGGAAGGAATTTGGTAACTCTACTGCAGATAATGTGTATTCATGTACAGACTCTCAAAATCTGGACATGGACTTCGGTGGGGTCGCACCCGATGATTTTGGCACCCACTTTCACTTTGACAAAGGAGTTACTACAGGTGCAGTCACAAGTATGATCAAGACCAAACAGGTGCAACTGGATAAAGAGAATCCGAATATGTACGAGACTACGTTCGTTGGGCATCACACATGCAATGCCACCACCATGTCTACGCATTCTGAAATAGACTATAGTTCCACTGCATGGGAATCATATCTTCTGAAATTTGGTCTACCAAATGTGCAAGATCACCACATTAGCTCACCAAACCTAACTATAAAAGAAGAACTTCCCAAAGAAGACACACCAAGTGATGTTACAAGTCACAATCTGGATCCTAACATTTGGATTGATTATGGTGCACGTAGAGATGGAATCTGA 1374 0.436 MNYNMLCSESGSLSARKKREIIKKIVKGQKAATQLKILLQNPFGTAPSPSSHQLMTNVLTSFTQALSIIQSSSSQPGSANGVARRDLLTSGAYGSPLTGSSHDPMSGHCREKRSQNGRRELGYREGGFDELGCVRKYGRSVSLVYISEKRFSRKGAVTWTILSSTTDDDHAWRKYGQKGILNSEFPRSYFRCSYKYDQRCQAVKQVQVDEDNPRMYRTKYIGIHTCNPTPNTATHPTTWESYFLNSDHDSDPRGPLITSPTLFIKQDFSKETHTSSDLTDHKLLDPIMLSDLKDFELSNPTVVPLGKEFGNSTADNVYSCTDSQNLDMDFGGVAPDDFGTHFHFDKGVTTGAVTSMIKTKQVQLDKENPNMYETTFVGHHTCNATTMSTHSEIDYSSTAWESYLLKFGLPNVQDHHISSPNLTIKEELPKEDTPSDVTSHNLDPNIWIDYGARRDGI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00023 457 MobiDBLite consensus disorder prediction 105 121 - -
Spst8g00023 457 ProSiteProfiles WRKY domain profile. 161 229 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00023 457 Pfam WRKY DNA -binding domain 167 227 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00023 457 SMART WRKY_cls 166 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst8g00023 457 Gene3D WRKY domain 152 229 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst8g00023 457 MobiDBLite consensus disorder prediction 93 121 - -
Spst8g00023 457 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 359 392 IPR044810 GO:0003700
Spst8g00023 457 SUPERFAMILY WRKY DNA-binding domain 162 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00023 Spst-Chr8 221739 224985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00023 17 344 WRKY Transcription Factor Family AT3G56400 30.606 1.72e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst8g00023 WRKY 2e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00023 - - gmx:100796071 270.781