Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00015 ATGGTCACGCCGTTTTCCATTACTCTCTTTCTTAACAAAACACACTCCCACACCAACCACTACCACTCTCCAAATTCAATTGCCCGTTCCCTCCCAATTCCCAATTCCCAATCCCCAAACCCTACCCCCATGGATTCCCGCGACTCCTCCCCTCGCTCCCGCGACCCCGACGCCGACGCCAACCACCACTACCACCACTCCTTCGACGACCCCCCGCCTTCCCTCCACCCCAAGGTCAAGCTCATGTGCAGCTACGGCGGCAGAATCCAGCCCCGCCCCCACGATAACCATCTCACCTACGTTGCCGGCGACACCAAGATCCTCGCCGTCGACCGCCACATCAAGCTACCCGCCCTCCTCGCCAAACTCTCTTCCCTCGCCAACGCCCCCGCCAACGCCACATTCTTCAAGTATCAGCTCCCTGGCGAGGACCTTGACGCCCTCATTTCCGTCACCAACGACGAAGACCTCCACCACATGATGTTCGAGTACGATCGCCTCTCCCGCATCTCGCCTAGACCCGCACGCCTCCGCCTCTTCCTGTTCTCGCTCCACAACAACAACAACAACATCAATTTTGCACTCACTGATTCCAAACCGGAGCGCCAGTGGTTCGTCGACGCTCTTAACTCCGTTCAGGTTCCGCTTTTGGAAGGTTCTTCGACGCCGCCAACGGCGACGCCGAATCCGGATTTTCTCTTCGGTTTGGACAAGCCGGCTACGGTGGCTCCCGATGCTCCGCCGAAGAATCCTTCGCCGGAATCTGAAGGCTTCTCAGAGGATCGTCCAGCGGTCAGAGATGCAGAAACCGAAACCGAGCGCCTGCCCGAACCTGAGATTAGGATGTTGCAGTCTGGGAACAACAATGAGCAACAGTTGCAACGGAAGATGACAACAGAGGAAGATAATAACGGTAGGGTTTACGGCGTTAACAGTGCGGAAGCTTTCGGTCAGAAGAACACGGAGAATGTGACGCCGTTAGTTGCGCAGGGGCAAATGCACGCGCAAGGTTTTCATTCTGGAACGGTGTCGTTTTTGCAGGAGAGGAATAATGCGGGATATTCGTTGGCGGTTCCTACGACCGGGAGTGAGATTTATCTCATTCAGACGCCTTCTGGAATGTTCCAAGCGGTTCGGCCAGTGACTGGACCGGTAGGCCAACCGGTTTATCTGGTTGCGGCGCCTGGTTCAGTGGGTGTGGCAGCGGAGCGTGCATATTCTGCGGGACACGGCGGCGCGCGGTGGTGA 1248 0.5713 MVTPFSITLFLNKTHSHTNHYHSPNSIARSLPIPNSQSPNPTPMDSRDSSPRSRDPDADANHHYHHSFDDPPPSLHPKVKLMCSYGGRIQPRPHDNHLTYVAGDTKILAVDRHIKLPALLAKLSSLANAPANATFFKYQLPGEDLDALISVTNDEDLHHMMFEYDRLSRISPRPARLRLFLFSLHNNNNNINFALTDSKPERQWFVDALNSVQVPLLEGSSTPPTATPNPDFLFGLDKPATVAPDAPPKNPSPESEGFSEDRPAVRDAETETERLPEPEIRMLQSGNNNEQQLQRKMTTEEDNNGRVYGVNSAEAFGQKNTENVTPLVAQGQMHAQGFHSGTVSFLQERNNAGYSLAVPTTGSEIYLIQTPSGMFQAVRPVTGPVGQPVYLVAAPGSVGVAAERAYSAGHGGARW 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00015 415 SMART PB1_new 93 184 IPR000270 GO:0005515
Spst8g00015 415 CDD PB1_UP2 82 182 - -
Spst8g00015 415 MobiDBLite consensus disorder prediction 20 47 - -
Spst8g00015 415 Pfam PB1 domain 95 182 IPR000270 GO:0005515
Spst8g00015 415 MobiDBLite consensus disorder prediction 20 75 - -
Spst8g00015 415 MobiDBLite consensus disorder prediction 255 277 - -
Spst8g00015 415 Coils Coil 283 303 - -
Spst8g00015 415 MobiDBLite consensus disorder prediction 219 277 - -
Spst8g00015 415 Gene3D - 99 183 - -
Spst8g00015 415 PANTHER OS05G0427100 PROTEIN-RELATED 45 333 - -
Spst8g00015 415 MobiDBLite consensus disorder prediction 48 73 - -
Spst8g00015 415 SUPERFAMILY CAD & PB1 domains 94 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00015 Spst-Chr8 121619 122866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00015 78 220 MAP Kinase Kinase Kinase AT5G57610 42.361 1.81e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00015 - - vra:106764239 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst8g00015 8 121619 122866 Spst8g00015 8 121619 122866 ECH