Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst8g00013 ATGCAAGAAGGAACACTCTTCTTCATGGGTTGTGTTCCGGCATGCATTTCCTTGGATAATCATAATTCAATTAAGCATAAATTGGAGCTTGTTGATAAAATTTCATTGGTGTCTTGTCTTCACATTCTTTTGGTGGTGAGAGAGAAGGGAGAAAAACCATTATCAAAAAAGAGGAGAAAGGGCAAGATGGTGTTGAGGAAAGTGGGGAAGTATGAGATTGGAAGGACCGTTGGAGAAGGAACCTTTGCCAAGGTAAAGTTCGCTCAGAACACGGAAACTGGCGAGAGTGTTGCCATGAAGGTGCTCGACCGTAGCACCATCATCAAGCACAAAATGGTCGACCAGATGCTAGAGATCAAGAGGGAAATTTCTATTATGAAGCTAGTCAGGCATCCATATGTTGTTCGTCTGTGTGGTGAATTGTTTGATAAAATTGTAAGCCATGGGCGTCTCAGCGAAGCTGAATCTAGAAGATATTTCCAACAGCTTATTGATGGTGTAGATTACTGCCACAGTAAGGGTGTTTATCACAGAGATTTAAAGCCTGAAAATCTTTTACTTGATTCACAAGGAAATATAAAGATTTCAGATTTTGGTTTGAGTGCATTTCCAGAACAGGGGGTCAGTATGCTTCGGACAACTTGTGGAACTCCGAATTATGTAGCTCCTGAGGTACTCAGTCACAAGGGTTACAATGGTGCTCCGGCAGATGTTTGGTCCTGTGGAGTTATCCTCTATGTTCTATTGGCTGGATATCTTCCCTTTGACGAACTTGATCTAACTACGTTGTACAGTAAGATTGAGAAAGCACAGTTTTCATGCCCTACTTGGTTTCCTGTGGGAGCAAAGTCTTTAATACACAGAATTTTGGACCCAAACCCTGAACATCGTATTACCATTCAGCAGATAAGGAATGATGAGTGGTTCCAGAAGGGATATGTTCCAGTCAGTCTCCTCGAGTACGAAGATGTAAATCTGGATGATGTAAATGCTGCATTTGACAATGTTGAGGATCAGATCACTAATAGGCAACGTGAAAATGCCGACATGGGTCCTCTCACTCTTAATGCATTCGACATGATAATTTTATCTCAAGGCTTAAACCTAGCAACCTTATTTGATCGTGGACAGGACACTCTGAAATATGAAAAACGCTTCATCAGTCAAAAGCCACCGAAAGTGATTTTATCAAGTATGGAAGTTGTGGCACAATCGATGGGATTTAAGACGCATATTCGCAACTACAAGATGAGAATAGAGAGCATTTCAGCAAACAAGGCTTCTTATTTCTCAGTTATATTGGAAGTTTTTGAAATTGTTCCTACTTTCTTCATGGTGGACATTCAGAAAGCAGCTGGAGATGCTAGTGAATATCTCAAGTTTTACAAGAATTTTTCTAGCAATCTTGAGGACATCATGTGGAAACCACCCCATGAAAAAAGCAAATTAAGGAACTCCCGAGACTAA 1467 0.407 MQEGTLFFMGCVPACISLDNHNSIKHKLELVDKISLVSCLHILLVVREKGEKPLSKKRRKGKMVLRKVGKYEIGRTVGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMVDQMLEIKREISIMKLVRHPYVVRLCGELFDKIVSHGRLSEAESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNIKISDFGLSAFPEQGVSMLRTTCGTPNYVAPEVLSHKGYNGAPADVWSCGVILYVLLAGYLPFDELDLTTLYSKIEKAQFSCPTWFPVGAKSLIHRILDPNPEHRITIQQIRNDEWFQKGYVPVSLLEYEDVNLDDVNAAFDNVEDQITNRQRENADMGPLTLNAFDMIILSQGLNLATLFDRGQDTLKYEKRFISQKPPKVILSSMEVVAQSMGFKTHIRNYKMRIESISANKASYFSVILEVFEIVPTFFMVDIQKAAGDASEYLKFYKNFSSNLEDIMWKPPHEKSKLRNSRD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst8g00013 488 ProSitePatterns Protein kinases ATP-binding region signature. 77 109 IPR017441 GO:0005524
Spst8g00013 488 FunFam Non-specific serine/threonine protein kinase 349 475 - -
Spst8g00013 488 ProSiteProfiles NAF domain profile. 350 374 IPR018451 GO:0007165
Spst8g00013 488 Pfam NAF domain 352 410 IPR004041 GO:0007165
Spst8g00013 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Spst8g00013 488 FunFam Non-specific serine/threonine protein kinase 136 316 - -
Spst8g00013 488 Coils Coil 326 346 - -
Spst8g00013 488 SUPERFAMILY Protein kinase-like (PK-like) 68 322 IPR011009 -
Spst8g00013 488 Pfam Protein kinase domain 71 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00013 488 Gene3D Kinase associated domain 1, KA1 353 475 - -
Spst8g00013 488 ProSiteProfiles Protein kinase domain profile. 71 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00013 488 CDD CIPK_C 356 471 - -
Spst8g00013 488 SMART serkin_6 71 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst8g00013 488 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 64 460 - -
Spst8g00013 488 Gene3D Transferase(Phosphotransferase) domain 1 64 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst8g00013 Spst-Chr8 101018 115201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst8g00013 63 435 CBL-interacting serine-threonine protein kinases AT4G24400 76.471 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst8g00013 Pkinase 2.9e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst8g00013 - - gmx:100816735 776.933