Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01533 ATGGAGGAAGAGGCTAAGGATTCTGAGGAAGAGCGCGTAGATTCTAAGCTGGGAAAATCAGCGGGGAGAAATCTAAAACAAAGCCCTCTTAGTTCAAAATTTGGTACAGCTGCAACTCATGGATCTTCGAGATCAGTAACAGAGGCATCAAACGCCTTACCAGATCTTACTGGTCCACGGGTTTTGCCAAATATCAATAATGGTGAAGACTCTTCGGCCACTACAGGAAACAAGAACAAATCTTATCAAGAACGGAGCTTTCCTAATGTTCATGACCCAACGATAAGCGATCAGACTCCTAATATTTCTAGATATTCTACATTACGTCAATCATCTGACAAATATATGAAGACAAATGAGTCTAAGAATGCTGATTTTCCAAAGGCACTTGACTCCCGGGATACTGGCAATATTGGAAATTCAAATCCATTTGGTCAGCAATTTGGTCTGCATGATAACGACATGGAGTCTAAGAAGTTTGCATCTGGAGTTGCACATTCAAATGAAAAGCCTAGCACTACAAGTTATTTTAGGAATAACCAAAGGGAATTTTCTCTCTCGAGGATCTTAGACGAAAGCTCAGGCAGAGAAAACAAATGTGAAAACAGTAAGGCTGACGGGGCAAGTGAGCTTATCAAATCTACCAGGGTTGAAAATTCTGGGAGACGAAATGATTTTACTGAAGAGGATGAACCAAGTAGTATATTGCCTCAAAAGAGGGCAAATGAATCTTCTTTTACAAAATTAAAATCAAGAAAGGTGCCTTCTAATTCAAAAATCTTCATCCAATCAGCAAATGGTAAATCTCAAGGATTAAAAGTGACATCTCAGGTTGATGAGCCACCCAAAGCTGATGACTATTTTTCTAAAGGCAAAGATGGCATAAATAACTCAAACACTTGCTTAGTTTTGGAACCTGTTGGTTCTACCTCTAATTCACTGGCATTTGATGAGCCTTTCTCCAGAAATGCTACCCCAGAATCTGCTCAGTGTGATAATGTCTGTCAGAATTGTCCACAAACGGCAGTTCAGAACTTAAGTGAGCCTAAAATCAATGGCAAGCCTGATGTCACAAGCTCTGGATTGCGACAAGTTAACGGTAATGAAGCAGGGAAACATAATGTCATTATAAATAATGGGTGTTCATCACTGGGAAACAAAAGCTCAAATAATGTGGAATCCGCTGGTTGTACTAACTTGGCTTTAAGCAATGAAGAATGTAATAAGCTGGTTAGGAAATCTCCCCGAAAGAAATCAGTTGCCATGAGAAATTCAGGTTCTAAACCTAAAGTAGGTGCCATTGCTAGAAATAAAACATCGCTTTGCTTGAATAAAACTACCCTGCAAGGTGAAGGTGTAACTCTATCCAGTGGAAGCAGAGAGATTGGTGATGCAAAGATTCATCAGGGATGTCCCCAAATCCGTAATATTAAGAAAACAATGGAGAAAGAAGCAGTTCGTAAAAATACAGTTGATCCCTGTGACAGAGCTGAGTTTTTGGAGGATGAAACCGAGGCTCCAGATGATAAATGTAAATTTGAGTTTGGAATGGCACTAAATGAAGAATCAGTTCATCTTTTGGAAAAGCCGAATAGAGCAAAAGAAGAGAAGTCAGAAGCAATTTGCCCTGCAACAAAAGTTGAAGAGGCAATGCCTCCTAAGAAAGGCACACATAAAACAGAAAATCAGAAAACGGCTTCACTAGTAGTAAAGTACCAAACAAGGAAACGTGCTGCCGGTAAAGCCAAGGCCACTGTTAGTAAATACGCAGAAGATGTTGGTGACAGAACTGAGTTTTTGGATGATGAAGCCGAAGCTCCAGATGACAAACGTGAAAATAAGTTAGGAATGGCACCTGAAGAAGTGGTTCGTCCTTTAAAAAAGCCAGATAAATCAACAGAAGAGAAGGCAGAAGCAATTTGCCCTGCGACCAAATGTGAAGAGGCAATACCTCCTAAAAAAGGCACAAATGAAACAGAAAAACAGAAGCCATCTTCACTGGTAGTAAAGCATCAAGCAAGAAAACGTCCTGCTGGTAAAGCCAAGGCTACAGTTGCCAAGGAATTATTGAAATCTAAAGTGGAAGTATCTAGGGAGAACATTCTTAATGAAACGGGGGATGAGGCAGAGATAGAAACCATGGAAGAAATGTCCCTTCCTGCTGATAAACATAACAACTCAGCCATTGCAAGAAAGAAGTCAGAGAACTTAGTTGAAGAAGATAAGGAGAATAGACCAATTGATGGACTGCAGGATTTAGTGGAGGGAAGAAGCGATGGTAATCCAACTAATAAATCTAATGTCATGCTGGCAAAAATCAAGTCTACTAAAGTGGGACTCAGATCTTCTATATCACAATCAAAGACGAGAGTAAAAACTGAAGCGACTTGTTTTATATTAAGCGGGCACCGCCTGCAGAGAAAAGAGTTTCAGCAAGTCATCAAGCGCTTAAAAGGAAGGGTTTGCCGGGATTCTTCTCATCAGTGGTCATATCAGGCGACACACTTCATAGCTGCAGACCCCATACGCAGGACCGAGAAATTTTGTGCTGCGGCTGCATCAGGAAGGTAA 2571 0.4061 MEEEAKDSEEERVDSKLGKSAGRNLKQSPLSSKFGTAATHGSSRSVTEASNALPDLTGPRVLPNINNGEDSSATTGNKNKSYQERSFPNVHDPTISDQTPNISRYSTLRQSSDKYMKTNESKNADFPKALDSRDTGNIGNSNPFGQQFGLHDNDMESKKFASGVAHSNEKPSTTSYFRNNQREFSLSRILDESSGRENKCENSKADGASELIKSTRVENSGRRNDFTEEDEPSSILPQKRANESSFTKLKSRKVPSNSKIFIQSANGKSQGLKVTSQVDEPPKADDYFSKGKDGINNSNTCLVLEPVGSTSNSLAFDEPFSRNATPESAQCDNVCQNCPQTAVQNLSEPKINGKPDVTSSGLRQVNGNEAGKHNVIINNGCSSLGNKSSNNVESAGCTNLALSNEECNKLVRKSPRKKSVAMRNSGSKPKVGAIARNKTSLCLNKTTLQGEGVTLSSGSREIGDAKIHQGCPQIRNIKKTMEKEAVRKNTVDPCDRAEFLEDETEAPDDKCKFEFGMALNEESVHLLEKPNRAKEEKSEAICPATKVEEAMPPKKGTHKTENQKTASLVVKYQTRKRAAGKAKATVSKYAEDVGDRTEFLDDEAEAPDDKRENKLGMAPEEVVRPLKKPDKSTEEKAEAICPATKCEEAIPPKKGTNETEKQKPSSLVVKHQARKRPAGKAKATVAKELLKSKVEVSRENILNETGDEAEIETMEEMSLPADKHNNSAIARKKSENLVEEDKENRPIDGLQDLVEGRSDGNPTNKSNVMLAKIKSTKVGLRSSISQSKTRVKTEATCFILSGHRLQRKEFQQVIKRLKGRVCRDSSHQWSYQATHFIAADPIRRTEKFCAAAASGR 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01533 856 MobiDBLite consensus disorder prediction 64 114 - -
Spst7g01533 856 MobiDBLite consensus disorder prediction 21 52 - -
Spst7g01533 856 MobiDBLite consensus disorder prediction 134 148 - -
Spst7g01533 856 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 1 856 IPR044254 -
Spst7g01533 856 MobiDBLite consensus disorder prediction 216 236 - -
Spst7g01533 856 MobiDBLite consensus disorder prediction 651 667 - -
Spst7g01533 856 Pfam BRCA1 C Terminus (BRCT) domain 801 854 IPR001357 -
Spst7g01533 856 MobiDBLite consensus disorder prediction 166 188 - -
Spst7g01533 856 MobiDBLite consensus disorder prediction 1 250 - -
Spst7g01533 856 MobiDBLite consensus disorder prediction 603 642 - -
Spst7g01533 856 MobiDBLite consensus disorder prediction 189 206 - -
Spst7g01533 856 MobiDBLite consensus disorder prediction 115 129 - -
Spst7g01533 856 Gene3D BRCT domain 789 856 IPR036420 -
Spst7g01533 856 MobiDBLite consensus disorder prediction 595 684 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01533 741 855 Core DNA Replication Machinery Family AT4G02110 47.656 4.22e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01533 K10728 - gmx:100799144 1102.43