Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01532 ATGGATTACTTAACTGCCAGTAGTCAGGAAGGAAAATTCTTGGCGGAGGAGCCTTATGAGTGGCACAAGAATGGTCTCAGTGAAGATGGCGCAATCAATATGGAGGCTCCGAGAAAGTGGCGGCTATTAAAAGAAAAAACAGGTCATGGCGCCTTCTATGGAATGCGTATTGTTGTATACGGCGATTGCATTGCTCCGCCTTTGGAAACTCTGAAACGTGTCATCAAAGCTGGCGATGGAACAATATTAGCAACTTCTCCTCCTTATACTCGCTTCCTGGGTACCGGAATCGACTATGCTGTAGTTAGCCCTGGCATGCCACGTGTTGATATGTGGGTCCAAGAGTTCTTAAAACATGAGATACCTTGTGTTGTAGCGGACTATTTGGTGGAGTATGTTTGCAAGGCCGGGTTCTCCTTGGAGAGACATGTATTATATGGCACTCATGCTTGGGCAGAGAGATCATTTGATGAACTTAAAAGCAGGGCAGAAGAGATTGATGAAGAACTCGATGCTCCTGATGCCTCTAGTGATGATGATGATGTAGTTTGCCAAGTGTGTGGATCCGGCGACAGAGGGGATGTAATGTTGATTTGTAGTGATGAAAGTGGTTCTTTGGGCTGTGGAGTGGGTACCCACATCGATTGCTGCGATCCTCCACTAACAGATGTCCCTGAGGAGGACTGGTTTTGTTCGAAATGCAGTACCACCCGAAACTCCGCAAACAATCCCATTAAAAAGAAAAAGAGTTTTTTATCTTCATCAATGACCAAGTGA 777 0.4556 MDYLTASSQEGKFLAEEPYEWHKNGLSEDGAINMEAPRKWRLLKEKTGHGAFYGMRIVVYGDCIAPPLETLKRVIKAGDGTILATSPPYTRFLGTGIDYAVVSPGMPRVDMWVQEFLKHEIPCVVADYLVEYVCKAGFSLERHVLYGTHAWAERSFDELKSRAEEIDEELDAPDASSDDDDVVCQVCGSGDRGDVMLICSDESGSLGCGVGTHIDCCDPPLTDVPEEDWFCSKCSTTRNSANNPIKKKKSFLSSSMTK 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01532 258 SMART PHD_3 183 235 IPR001965 -
Spst7g01532 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 169 257 IPR013083 -
Spst7g01532 258 SUPERFAMILY FYVE/PHD zinc finger 177 240 IPR011011 -
Spst7g01532 258 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 2 248 IPR044254 -
Spst7g01532 258 Pfam PHD-finger 183 235 IPR019787 -
Spst7g01532 258 Gene3D BRCT domain 1 47 IPR036420 -
Spst7g01532 258 MobiDBLite consensus disorder prediction 237 258 - -
Spst7g01532 258 Gene3D BRCT domain 48 150 IPR036420 -
Spst7g01532 258 ProSiteProfiles Zinc finger PHD-type profile. 181 237 IPR019787 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01532 2 164 Core DNA Replication Machinery Family AT4G02110 66.871 1.95e-82 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Spst7g01532 PHD 1.2e-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01532 K10728 - gmx:100783461 451.055