Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01513 ATGGAAAAACAAGTGAATTTGTTGAAGTCAAGAAAGAGGGTGTCCGAATTGGAAGCTGAAATTGAGCAGTGGGCTCAACTGCTACGGCCCATGAAATCATCATCAACAAACATGGCTAGATTTCTGAGTTCAGACCTTCATAGTACTACCAATGTCTCCTTCTCTCACATTAAGAGCAAGGAAATAAAATATCATCACGTGGCTCCCTTATTGTTTCAAGCATTTGAGATGGTTCCATACTTGGTGGAAATCTCATACATAGGGGTGGAAGGTCTCTTTTTCTCGTACTACACTGATAATGATGATGCTCTAGCTATGTACTCCAACTCATCATCTACTTGGGGTGCCTCCAATATAACCTACATTCAACCTGTGAATCGTGAAACCGGAGAAGTTCATGGGAAAGCCACAAATATAGTATCTAACCCCTTTATGAATGCAAGTTGGATAGAGGAAGCACTTAACATGTCAAGTGGGTTTTCCTCATTGGGAACCAAGTGGGGCAATGATGATCTTTTGTTCCTCAGTTCAGCCAGAATCATGAGAAAAGGAGTGATCTCTCTTGGATTTTCAGCAGGAAAAATAACTGATTTTGTCACTCGCATTGACCAACAACATGGCACAATGTCCTATTTAGCTACCAAAGATGGAAAAGTTCTTGTGGGAGGGATTCAACTTACCCATTTGGTAATTTCTGATGATACAGTTTTGTTCCAATCAGTGAATGCAAACAGTGATTCCACAAGTAATGAGGGCACTGTCTCATGCAAGGATGAAGCTGCTGCTTCTAGTTTCATTATTCGGGATACTGCCTATTCAATTCACTGCCACACCATCGATATAATGGGAATAGAATCGGTGTATGTGATGGCTGTCCCGAAAGATGGCTATGCGAGCATTGATCGGAATTACAAGAAAAAGGGATTGATATTGTTTGTGGCAACGATGGTTACAATATTTATTGCTTTCTTCAGTTTTCTATATGTTACCTGTACAGCCTTGAGACGAGAAATGCATCTGTGTGCGTCACTAATCAAACAGTGTGAAGCCACCCAACAAGCTGAGAAAATGAATATGAATAAGAGTGCCGCTTTTGCAAGTGCCAGCCATGATGTTCGTGCTTCTCTCGCAGGCATCACCGGTTTGATAGACATATCTTCTGAGTTGGTTGCCCCTGGTTCAGAATTGGAGACCAATTTGAAACAAATGCATGGTTGTACCCAAGACTTACTAGGACTGTTGAATTCTATACTAGACACAAGCAAAATAGAGGCAGGAAAAATGCAACTTGAAGAAGAGGAGTTTGATGTGTTCCATCTCTTAGAAGATGTAGTTGACTTTTACCATCCCGTGGCTGCGAAGAAAGGTGTAGATCTCGTGTTGGACCCTTGTAATGGTTCTATAGTGGGATATTCACGGGTGAAAGGTGATAGGGGTAAACTCAAACAAGTTCTGTGTAATTTATTGAGCAATGCTGTGAAATTTACTGATGAGGGTCACATAGTTGTGCGCGCATGGACTCGGAAGGCAAGATTATTGCAGAATTCGACAGTCACTTGCAACCAATTTGAGTTCAAGCAATATTTATCATGTTTATTTCGTAACAAAATCGAAGCACGTGGTGATGTCGAATCCACACGTTCAATCCAAGGAGATCCGCAATCTATGGATTTTATATTTGAAGTGGATGACACAGGAAAAGGAATTCCTAAAGAGAATTACAAGTCTGTGTTTGAGAACTATGTCCAAGTCAAAGATACTGCTATTGGCCAAGGAGGAACTGGCTTGGGACTTGGGATTGTGCAGTCGTTGGTGCGTTTGATGCATGGAGATATTGAAATTGTGGAGAAGGATACTGGTGAAAAAGGGACATGCTTCAAGTTCAATGTGCTTCTCACTGTTTGTGAGTGCGAGGCAGTGACTGATGGTAGCAGAAAGGAAGGTATTGGGTGTGGATCGGGAGATGGAATGCAAGCTCAGGGGCAAACCGTGCATGCTTCAAGTTCTGGTTCTTCTAGAATTTGTTCCATGAGTCCTAGGTTACGTATTTGCAGCTCTAGTCCTAAGTCTGAGGCTTCCCTAGTGGTTCTTTTGATTGTTGACGAGGAGCGCCAAAGGACTTCACAAAGGTTCATGGAGAGGTTAGGGATCAAAGTTAAAGTTGTGAATACTGGGAAACATCTGTTTTATACTCTCAGGAAGATCAAACAGAAGGCTAAGCATTCTAGTGGCCAAAATTCTCCAGGGTCTTCAGATTTGAGTTATTGGTCTACACCTCATAGTTCACTTGACATATCCACAAGAGTTCCACTGAGTTCTATGGATGGAACTGAGCATAACATGCCTTTAGTTTTCAAGAAAACTGATATTGGAGCATCCCCCGGCTTCATCCTTATTGTGATTGATGCAAATGCAGGATCATTTTCTGAGCTTTACATGATTGTATCCAGCTTCAAGAAAGACCTTCGCAACCCTTGTAAGGTTGTGTGGCTAAATAAGCCCTTTATGCGTAGAATCAACTTCAAGGCCCTCAATCAAGATGACATTGTCACTTCCAAACCATTTCATGGTACTCGTTTGTTCCAAACCATAAAGCTCCTTCCTGAATTTGGTAGTGATTGGCAAAGCAATTCCCATAGAGCTAATAGAGAAAGGACTAATGAGAGAGCTAAATTGAAGACTTACAAGGATCCAGGTTTGTTAAAATACACGTCTCCTCTGCTGGACAGATCACAAATGTCTTCAACTGATGAAAACACATTCCAAAGTGCTGAACAAATTTTGAAGGGTAAACGACCATCCAAGACAAAACTAACTCTTGTTCATCAAGGAGAAATCCAAGAGTGTGAAAACTCATCAGGGTGTCACAAACCCTTGAGTGGTAAGAAGTTTTTGGTTGCTGATGACAGTGCATTGCTACGAAAGATAGCTTCAGTTACTTTGATTTCTCTTGGTGCAAGCATGGAGCAATGTGAAAATGGTGAACAAGCTGTGAGGCTAGTTGATGAGGGTCTACCTCGGGAGTTCCCTAATCCTCCTTATGATTACATCTTAATGGACTGTCAGATGCCAGTAATGGATGGGCTTGAGGCAACAAAGTGGATACGAAAGATAGAGAAAGCGTATGGTGTTCACATTCCTATCATTGCATTGACATCTGGGACCGAAAGAATAACCATAAAGAGTGGAATGGACTATCATATGTTGAAGCCAATTAACAAAGAGGATTTACTTAAAGCAATCACATATATAAATGGTAGAGTTTGA 3267 0.4135 MEKQVNLLKSRKRVSELEAEIEQWAQLLRPMKSSSTNMARFLSSDLHSTTNVSFSHIKSKEIKYHHVAPLLFQAFEMVPYLVEISYIGVEGLFFSYYTDNDDALAMYSNSSSTWGASNITYIQPVNRETGEVHGKATNIVSNPFMNASWIEEALNMSSGFSSLGTKWGNDDLLFLSSARIMRKGVISLGFSAGKITDFVTRIDQQHGTMSYLATKDGKVLVGGIQLTHLVISDDTVLFQSVNANSDSTSNEGTVSCKDEAAASSFIIRDTAYSIHCHTIDIMGIESVYVMAVPKDGYASIDRNYKKKGLILFVATMVTIFIAFFSFLYVTCTALRREMHLCASLIKQCEATQQAEKMNMNKSAAFASASHDVRASLAGITGLIDISSELVAPGSELETNLKQMHGCTQDLLGLLNSILDTSKIEAGKMQLEEEEFDVFHLLEDVVDFYHPVAAKKGVDLVLDPCNGSIVGYSRVKGDRGKLKQVLCNLLSNAVKFTDEGHIVVRAWTRKARLLQNSTVTCNQFEFKQYLSCLFRNKIEARGDVESTRSIQGDPQSMDFIFEVDDTGKGIPKENYKSVFENYVQVKDTAIGQGGTGLGLGIVQSLVRLMHGDIEIVEKDTGEKGTCFKFNVLLTVCECEAVTDGSRKEGIGCGSGDGMQAQGQTVHASSSGSSRICSMSPRLRICSSSPKSEASLVVLLIVDEERQRTSQRFMERLGIKVKVVNTGKHLFYTLRKIKQKAKHSSGQNSPGSSDLSYWSTPHSSLDISTRVPLSSMDGTEHNMPLVFKKTDIGASPGFILIVIDANAGSFSELYMIVSSFKKDLRNPCKVVWLNKPFMRRINFKALNQDDIVTSKPFHGTRLFQTIKLLPEFGSDWQSNSHRANRERTNERAKLKTYKDPGLLKYTSPLLDRSQMSSTDENTFQSAEQILKGKRPSKTKLTLVHQGEIQECENSSGCHKPLSGKKFLVADDSALLRKIASVTLISLGASMEQCENGEQAVRLVDEGLPREFPNPPYDYILMDCQMPVMDGLEATKWIRKIEKAYGVHIPIIALTSGTERITIKSGMDYHMLKPINKEDLLKAITYINGRV 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01513 1088 Pfam His Kinase A (phospho-acceptor) domain 362 426 IPR003661 GO:0000155|GO:0007165
Spst7g01513 1088 SMART HKATPase_4 476 634 IPR003594 -
Spst7g01513 1088 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 428 IPR036097 GO:0000155|GO:0007165
Spst7g01513 1088 SMART REC_2 962 1081 IPR001789 GO:0000160
Spst7g01513 1088 Gene3D - 347 427 - -
Spst7g01513 1088 PRINTS Bacterial sensor protein C-terminal signature 558 572 IPR004358 GO:0016310|GO:0016772
Spst7g01513 1088 PRINTS Bacterial sensor protein C-terminal signature 576 586 IPR004358 GO:0016310|GO:0016772
Spst7g01513 1088 PRINTS Bacterial sensor protein C-terminal signature 592 610 IPR004358 GO:0016310|GO:0016772
Spst7g01513 1088 Gene3D - 428 638 IPR036890 -
Spst7g01513 1088 SUPERFAMILY CheY-like 959 1083 IPR011006 -
Spst7g01513 1088 Coils Coil 7 27 - -
Spst7g01513 1088 SMART HisKA_10 360 426 IPR003661 GO:0000155|GO:0007165
Spst7g01513 1088 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 415 629 IPR036890 -
Spst7g01513 1088 Gene3D - 942 1084 - -
Spst7g01513 1088 PANTHER TWO-COMPONENT HISTIDINE KINASE 78 1082 - -
Spst7g01513 1088 CDD HisKA 358 422 IPR003661 GO:0000155|GO:0007165
Spst7g01513 1088 Pfam Response regulator receiver domain 965 1081 IPR001789 GO:0000160
Spst7g01513 1088 ProSiteProfiles Response regulatory domain profile. 963 1085 IPR001789 GO:0000160
Spst7g01513 1088 ProSiteProfiles Histidine kinase domain profile. 367 634 IPR005467 -
Spst7g01513 1088 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 632 IPR003594 -
Spst7g01513 1088 CDD REC_hyHK_CKI1_RcsC-like 964 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01513 Spst-Chr7 68363754 68373345 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01513 15 1074 Histidine Kinase Gene Family AT2G47430 40.217 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst7g01513 HATPase_c 3.7e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01513 - - var:108325233 1605.11