Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst7g01501 ATGGAGCCACTAACACGGATAAATACTGATGAAGATCATAATCAAAAGAAGCAACATGGTTTCAATTTTGATCATGTGATGCTGGACGAGTTCAACTTTGAACCTGTTCAGCTACCAAAGCAGTCTTCTTTTAAAGAAACTAAGGGACCAAAGGATAAACAAGTGCTGCCATCTGCTTTAGCATCACTGGAGCTCCTGAGCAATTATGGAAGCAGGATCAAGAGGCTAGGGAAGCAAAACATCAGCGATAGTGTGGAAACTTGCCACTCTACACAATGGCATGATGATATTTACATCCCCATGCACCCTTATGGAATTGGTCTTGGAGTTTTATCCGAGGAAGATAATAGAGACGTGGAACTCGCACAGTTTCTTCTGGCAGCTGCTGAGAGGGTATGGTGCCAAAAATTTGAACGTGCCAGCATGTTACTTTTCCATTTTCACTGGAACTCTTCAGGTGGTAGTGGTGGAAGCCCCGTTAAGAGAGTTGTCTTTCATCTCGCTCAAGCACTTCTAGAGAGAATCAAAAGAGAAACGGGACGAAAAGTGACACTGAACAAGTGTGATAAATACGAGGAAAGGGAAATGATTGAGAAGCTAACATGGGATACTAACATGGCTATTACATGCCATAAGAAAATTCCTTTCAATCAAGTAATGCAGTTAGCTGGGGTCCAATCTATAGTGGAACACGTGGCATTTCAAACCAGAATCCATCTCATAAACCTTGATATTGGATGTGGGGTGCAATGCACGACTTTGATGCAAGCACTGGCTGAGAGGGATGAAAGGCAGGTTGAGCTTCTGAAGATAACTGCCATTGGACTTCAAGTTTTTGTCACAAGCATCACAAAGATCAAGGTTGAGCAATTTGGAATTGAAGATAATGAAGCTGTGGCTGTTTATTTTCCTTATATGCTGAGGACTATGGTGTCGGATTCTGACTCCATGGAACACTTGATGAGGGTGATAAGCAAAATCAGACCAACTATAATGATAGTGCTTGAGTTGGAAGCAAAGCATAATTCACCGTCCTTTGTGAACCGCTTCATTGAAGCATTGTTCTATTATGCGGCATATTTTGATTGCATTGACTCCTGCATGAATCAGGATTATGAGTGCAGAACGAGAATAGAGAGAATATTATCAGAAGGGATACGAAACATTGTTGCTATGGAAGATGGAGAAAAGAAGGGTTAG 1200 0.4167 MEPLTRINTDEDHNQKKQHGFNFDHVMLDEFNFEPVQLPKQSSFKETKGPKDKQVLPSALASLELLSNYGSRIKRLGKQNISDSVETCHSTQWHDDIYIPMHPYGIGLGVLSEEDNRDVELAQFLLAAAERVWCQKFERASMLLFHFHWNSSGGSGGSPVKRVVFHLAQALLERIKRETGRKVTLNKCDKYEEREMIEKLTWDTNMAITCHKKIPFNQVMQLAGVQSIVEHVAFQTRIHLINLDIGCGVQCTTLMQALAERDERQVELLKITAIGLQVFVTSITKIKVEQFGIEDNEAVAVYFPYMLRTMVSDSDSMEHLMRVISKIRPTIMIVLELEAKHNSPSFVNRFIEALFYYAAYFDCIDSCMNQDYECRTRIERILSEGIRNIVAMEDGEKKG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst7g01501 399 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 87 394 IPR005202 -
Spst7g01501 399 Pfam GRAS domain family 122 276 IPR005202 -
Spst7g01501 399 Pfam GRAS domain family 279 397 IPR005202 -
Spst7g01501 399 ProSiteProfiles GRAS family profile. 112 399 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst7g01501 Spst-Chr7 68006961 68008302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst7g01501 157 397 GRAS Transcription Factor Family AT4G17230 26.354 1.12e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Spst7g01501 GRAS 4.6e-19 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst7g01501 - - gmx:100791952 406.371